Scyliorhinus canicula (smaller spotted catshark): 119957202
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Entry
119957202 CDS
T11175
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3 isoform X1
KO
K20995
Notch 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04330
Notch signaling pathway
scau04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119957202 (notch3)
04371 Apelin signaling pathway
119957202 (notch3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
EGF_3
NODP
Ank_4
Ank_3
Ank_5
EGF_Teneurin
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
119957202
NCBI-ProteinID:
XP_038640942
LinkDB
All DBs
Position
25:7895147..8083408
Genome browser
AA seq
2463 aa
AA seq
DB search
MDLKLWNLLWGLWLAAECGALQCRDSHRPCENNGRCIKSPHGDASCLCRPGYLGDLCQFP
DPCVRSPCLNGGICSSSVVDGTVQYTCSCTRGFRGANCSQIDACATSPCANGARCTNWNY
RYNCTCPPGFSGKHCRTDIDECKAPNLCKQGGLCINTPGSFRCQCPAGFTGRQCETIYVP
CAPSQCQNGGTCRQTGDLTYECACLPGFKGQNCEINIDDCPEHKCLNGGTCVDGVNTYNC
QCTPEWTGQFCTEDVDECHLQPNACHNGGTCFNTPGGHTCVCVNGWTGDDCSENIDDCAI
AVCFNGATCHDRVASFFCECRIGKTGLLCHLDDACVSNPCHEGAICDTNPVTGQAICTCP
SGFTGPACNQDVDECSIGANPCEHFGKCVNTEGSFQCQCGNGYTGPRCETDINECLSMPC
QNDATCLDRIGEFTCICMPGFKGTYCETDINECESNPCVNNGMCMDIVNGFICKCPSGFT
GLMCQIDNDECASTPCQNGAKCVDRPNGYECKCAEGFEGKLCERNIDDCSPDPCHHGTCA
DGIASFTCHCEQGYTGYRCENQINECHSNPCQNSGKCIDLVNEYLCHCQQGTSGVNCEIN
HDDCASQPCDYGMCQDGINRYDCICKPGFTGPQCNLEINECASSPCRNGGTCVDGEDGFS
CLCPDGYHDPLCYSEVDECSSSPCVHGICHDDINGYKCDCEAGWTGMNCDIDKDECESNP
CQNGGSCSDLVNGYICKCKEGFRGQHCQVNINDCASNPCLNKASCVDGIASYTCLCKLPY
TGPNCENVLVPCSPNPCANGGVCDHTLDYEGFVCTCAEGWQGRSCQVDVDECAANPCRNR
GSCTNTQGNYICACQPGFAGRDCEMDINDCTPNPCLNGAACLDQINSFVCNCLPGFAGAR
CADEINECQSNPCRNGGTCTDYVNSYTCTCKPGFNGLHCENNIPDCTESSCFNGGTCIDG
INLYICHCRSGFTGSSCQYDIDECSSQPCLNGGVCIDGLESYRCTCTHGYKGDRCQVSTD
WCSKSPCKNGGRCRPTRTSFTCDCASVWTGRYCDIPNVSCEVAAAQRGVATTQLCHHGGS
CFRAGTAHYCLCPKSYTGSYCENEVDQCASNPCHNSATCRSFIGGYMCECMPGYKGKTCK
LEVNECESNPCQNGGTCLDLIGRYICSCPPGTLGVLCEINEDDCGLSPGTNVPKCMNNGT
CVDKIGDYTCNCPPGFTGDRCEGDINECLSNPCNPQTTSDCVQLPNDYQCVCKPGFTGRQ
CQSVINMCESQPCQNGGHCKITVNTPLGYTCKCQSSFTGPNCERSILTCRELVCQYGQLC
IDSPLGARCTCPSGFPGLACHPLTTPSVTPACSSRTCRNGGTCKASRLPPFYQCLCPREF
TGRHCEVLRPYTTPPKVMTCSIQECQRRADDGHCDQECNTHACQWDGGDCSLSVDNPWRD
CNIQECWRYFNNNICDEFCNSRECLYDNFDCQNQERTCNPLYEKYCADHYADKLCDQGCN
NEECGWDGLDCAPDVPEHLAEGTLIVIVLLPPDELLKSSTNFLQKLGSILHATLRFKLDS
NGQYMIYPYYGSSTRLKKRSVALGRVPRELEQEIIGSKVNLEIDNRLCLQGAGECFPTAE
SAAAYIGALSAVGNLHFPYPIKDVDSEHLAPPPPPMNLLPLMIVAAVILTVILILGVLVA
RRKREQSLLWFPEGFTLKKESSNKNRREPVGQDALGMKHISKSMVEEGLISERDLQTEQW
LDTGSPEAKRLKVEEPTILSDNEDAVDCRQWTQHHLAAADIRMPPSMALTPPQGEFDSDC
MDVNVRGPDGFTPLMLASYCGGGLDTGLTEEEEQEDSSANIISDLIYQGANLCAQTDRTG
ETALHLAARYARADAAKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRNRATDL
DGRMVDGSTALILAARLAVEGMVEELIACHADVNAVDEIGKSALHWAAAVNNIDATLVLL
KNGANKDMQDSKEETPLFLAAREGSFEAAQMLLDHFANRDITDHMDRLPRDIAQERMHHD
IVQLLDEYNAVRSPQGQGVHMGSHSMSPLMCPPNSYMTNLKQTPQGKKARRPSSKNSGSG
NNSNMSKDSKEPKGRNKKLSLDCHASLMESSVTLSPVDSLDSPRAYVTNPTSPIVTSSGI
LHPAGSLSVLANPPVNGILEGPFTLSLGGLGDLGEVAQNAAILSMSHIQPRLSMSQVTGQ
PNCLLNASGLGLNVGMVSPITAVPFDWQTRIPSSQCNSVINLVQQSAGPHVGMHQPSQIL
QRGLVLQSHMTMGNGSQMINQQSPVKPQNPVEQQAISQASQAQQRHTPSTTGHSIQQSLL
RNEMARIPDRCNQSISPQEAQPPQANVPPFYKQHSNTTTEDYLTPSSKHSYSSGHDNTPK
HYLHLKNEHPYLTPSPESPEQWSSPSPHSMSDWSDSTPSPAIIGHQVQMQHMTEQATKMQ
VFA
NT seq
7392 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaactctggaatttactttggggactctggctggcagctgagtgtggagct
ctgcagtgtcgggatagccaccgcccttgcgaaaataatggacgatgcatcaaaagcccg
catggagatgcatcatgtctgtgtcggccgggttaccttggggacttgtgccaatttcct
gacccctgcgtaaggtcaccatgcttaaatggaggaatatgttccagttcagtagtagat
ggcacagtgcagtacacgtgcagctgtacgcgagggttccgaggagctaactgctcgcag
atagatgcctgcgccacaagcccgtgtgccaacggagctcgttgcacaaactggaactac
cgctacaactgtacctgcccgccaggcttcagcgggaaacactgccgcacggatattgac
gagtgcaaagctcccaacctctgcaagcaagggggactgtgcatcaacacccccggctcc
ttccgctgccagtgccccgccggcttcactggacgccagtgcgagaccatctacgtcccc
tgtgccccgtcccagtgccagaatggggggacctgccggcaaactggggacctgacctac
gaatgtgcctgtttaccaggttttaagggacagaactgtgaaattaacattgacgattgc
cctgaacacaagtgcctgaacggaggtacctgtgtcgatggtgtaaacacctacaactgc
cagtgtacacctgagtggacaggtcagttctgcacagaggatgtagacgagtgtcacctg
caacctaacgcttgccataatggaggaacctgcttcaacactccgggcggtcacacctgc
gtgtgtgtgaacggctggaccggtgacgactgcagcgagaacattgacgactgtgcaatt
gccgtgtgcttcaatggagccacatgccatgaccgggtggcatcgttcttctgcgaatgc
cgcatcggaaagacaggcctgctctgtcaccttgatgatgcctgtgtcagcaatccgtgt
catgagggggctatctgtgataccaacccagtaaccgggcaagccatctgcacatgcccc
tcaggattcacaggaccagcctgcaatcaagacgttgatgaatgctcaataggtgccaat
ccttgtgagcactttggaaaatgtgtgaataccgagggctcttttcagtgccagtgtgga
aatggatacacaggcccccgctgtgagactgacatcaatgagtgcttatccatgccgtgt
cagaatgacgctacctgcctggaccgaattggcgaattcacatgcatctgtatgccggga
ttcaaggggacttactgtgagactgatatcaacgagtgcgagagcaatccttgtgtgaac
aatggtatgtgcatggatatcgtcaatggctttatctgcaagtgcccctcagggtttacc
ggattaatgtgccagattgacaatgatgagtgcgcgagcactccctgccagaacggggcc
aagtgtgtcgataggcctaatggatacgagtgcaaatgtgcagagggttttgaagggaag
ttgtgcgagaggaatattgatgactgcagtcctgacccctgccaccacggaacatgtgcc
gacggcattgccagcttcacgtgccattgcgagcagggctacactggctaccgctgcgag
aatcagatcaacgagtgccatagcaacccatgtcaaaactctggcaagtgcatcgatctg
gttaacgaatacctttgccactgccaacagggaacttcaggtgtcaactgtgagattaat
catgatgactgtgccagtcagccctgtgattatgggatgtgccaggatggtattaaccgt
tacgattgtatctgcaaaccaggcttcacaggcccacagtgcaacctcgaaataaacgag
tgcgcgtcgagcccttgtcggaatggtggcacctgtgtcgatggcgaggacggcttctct
tgcctctgtccggatggctatcacgaccccctgtgttactccgaggtggacgaatgcagc
agcagtccctgcgtccacgggatttgtcacgacgacatcaacgggtacaagtgtgactgt
gaggcgggctggacaggaatgaactgtgacatcgacaaggatgagtgtgaatccaacccc
tgtcagaatggagggagctgttctgacctggtgaatggctacatttgtaaatgcaaagag
ggctttcgaggccagcattgccaagtcaacatcaatgactgtgcgtcaaatccgtgctta
aacaaagcgagctgtgtggatgggattgctagttacacttgtctgtgcaaactgccttat
acaggaccaaactgtgagaacgtgctggttccatgttcgcccaacccatgtgcgaatgga
ggcgtctgtgaccacactctggactatgagggctttgtgtgtacctgtgcagagggatgg
caaggacggagctgccaagtggacgtcgatgagtgtgcagccaacccctgcaggaatcga
ggctcttgcaccaacacacagggaaactatatctgtgcgtgtcaaccaggcttcgcaggg
cgtgactgtgaaatggacatcaatgactgtactcccaatccctgtctgaatggcgctgcc
tgcctggatcaaattaactcctttgtttgtaactgcctgccgggctttgcgggcgcccgg
tgcgctgacgagatcaacgaatgtcagagcaacccgtgccgcaatggcggcacctgcacg
gattacgtcaacagctacacctgtacctgtaaacctggctttaacgggctgcactgtgag
aacaacattcccgactgcactgagagctcctgttttaacggagggacctgtatagatggc
attaacttatacatctgtcactgccgctctggtttcactggttccagttgccagtatgac
attgacgagtgtagctcacagccatgtctgaatggaggggtgtgcattgatgggctggaa
tcctaccggtgtacctgcacccatgggtacaaaggtgatcggtgtcaggtcagtacggac
tggtgcagcaaatccccctgcaagaacggcgggcggtgtcgaccaacgagaacatccttt
acgtgcgactgcgcgagtgtttggacaggacgttactgcgacatccccaatgtgtcgtgc
gaagtggctgcggcacagcgaggagtggctacaactcagctttgccatcacggaggctcc
tgtttcagggctggaaccgcacattactgcctgtgtcctaaaagctacaccggcagctac
tgcgagaatgaagttgaccaatgtgcctccaacccatgtcacaacagtgccacctgcagg
agcttcattggaggctacatgtgtgagtgcatgccaggttacaaggggaagacctgcaaa
ctggaggtcaatgaatgtgagtcaaacccctgccagaatggaggcacctgccttgatctg
attggccgatacatctgctcctgtccaccaggaaccctgggcgtactttgtgaaattaat
gaagatgactgcggcctctctcccggcacgaatgtgcccaagtgtatgaataacgggacc
tgtgtggataaaattggagactacacctgtaactgcccaccagggttcactggcgatcgg
tgtgaaggtgacattaacgagtgcctgtcaaacccttgtaacccacagacaaccagcgac
tgtgtccagttgcctaatgattaccagtgcgtgtgcaagcctggcttcacaggccgtcag
tgccaaagcgtcatcaacatgtgtgaatctcagccctgtcagaacggcggccactgtaaa
atcacggtcaacacaccactcggctacacctgcaagtgtcaatcgagcttcactggacca
aattgcgaacgcagtattttgacctgtcgggagctggtctgccagtatggccagctgtgc
atcgattctcccctgggagcccgttgtacctgtccgtcagggtttcctggcctggcatgc
caccccctgaccacccccagcgtgacccccgcctgcagcagccggacgtgccgcaacggt
ggcacctgcaaggccagccggctgccccccttctaccaatgcctgtgcccgagagagttc
accgggaggcactgcgaagtgctgaggccgtacaccactccccccaaggtgatgacctgt
tccatccaggagtgccagaggagggcagacgatggtcactgtgaccaggagtgcaacaca
cacgcctgccagtgggacggaggtgactgttccctgtcagtcgacaacccctggagggat
tgcaacattcaggaatgctggcgatacttcaacaacaacatctgcgatgagttctgcaac
agccgtgaatgtctttatgacaactttgactgccagaaccaagagaggacctgcaatcca
ctatacgagaagtactgtgctgatcactatgccgataagctctgtgatcaaggctgcaac
aatgaggagtgtggctgggatggtctggattgtgcccccgatgtgcccgagcacctggct
gaagggaccctcattgtcatcgtgctgctgccacctgacgagctgctgaaaagcagcacc
aacttcctgcagaaactgggctccatcctgcatgccactctgcgcttcaaactcgacagc
aatgggcagtacatgatctacccctactacggcagcagcacccgactcaagaagcgctcg
gtggcactgggcagggtgccacgggagcttgagcaagaaatcatagggtcaaaggtgaat
ctggagattgataatcgactgtgcctccaaggagctggtgaatgcttcccaacagcagag
agtgcagctgcttatattggtgctttgtctgcagttggcaaccttcacttcccctatcca
ataaaggatgtcgatagtgagcacctggcaccaccgccgccccccatgaacctcctgccg
ctaatgattgtcgccgcggtgattctgacagtcattctgatcctcggggtattagtggcg
agacggaagcgggagcagagcttgctgtggttcccagagggcttcaccctcaagaaggaa
agcagcaacaagaacagacgtgaacctgtggggcaggacgcactgggaatgaagcacatc
tccaaatccatggtggaggagggtctgatcagtgagcgggacctccagactgaacagtgg
ttggacacaggaagccccgaggcaaagcggctcaaggtggaggaaccaaccattctgtcg
gataatgaagatgctgtcgattgtcggcaatggactcaacaccacctcgctgcagcagac
atccggatgccaccctccatggccctgacaccgcctcagggagagtttgattctgattgt
atggatgtgaacgtccgaggtccagatggcttcaccccactgatgctggcctcttactgt
ggtggaggactggacacaggcttgactgaggaagaggagcaggaggactcgtcggccaac
atcatctcagacctcatctaccaaggcgccaacctctgtgcgcagacggaccgaaccggc
gagactgccctccacctggctgcccgttatgcccgggcagatgctgccaagcgacttctc
gatgcgggtgctgatgccaatgctcaggacaacactgggcgaacccctctccacgctgca
gtcgcggctgatgctcaaggagtcttccagatactcatacggaatcgagccacagacctg
gatgggcgaatggttgatggatccactgctctgattctcgctgcccgcctcgctgtcgag
ggaatggtcgaggaactaatagcctgccacgccgatgtcaacgctgtggatgagattggt
aaatctgccttgcactgggctgcagcagtgaataatattgatgccactctagttttgctg
aagaatggagccaacaaggatatgcaggatagcaaggaggagacgccgctctttctggct
gcccgtgaaggaagctttgaagctgcccagatgctgttggaccactttgccaaccgagac
atcacagaccacatggatcgattaccacgggacattgcacaggagcggatgcatcacgac
attgtgcagctgctggatgagtacaacgctgtacggagccctcaggggcaaggggttcac
atgggctcacattcaatgtcccccctcatgtgcccgccaaatagttacatgactaactta
aagcaaacaccccagggaaagaaagcgaggaggcccagctcgaagaattcaggctccggg
aataatagcaacatgtctaaggactcgaaggaaccaaaaggaaggaacaaaaagttgagt
ttggattgccacgcatccctcatggaaagctcagtgacgttgtctcccgtggactcattg
gattcaccacgtgcctacgttaccaaccctacatcaccgatcgtgacatcctctggaatc
ctgcatcctgcgggctccttgtcggtgctcgccaacccgccagtgaatgggattctggaa
ggtcccttcactctttccttgggaggacttggtgatcttggagaagtcgctcagaatgct
gccatcttatccatgagccacattcagccacgcctctcaatgtcacaagtcactggccag
cccaactgccttctgaatgccagtggccttggtctcaatgtagggatggtgagccctatc
accgccgtaccctttgactggcaaacgaggattcccagctcacagtgcaactcggtaatc
aacctcgtgcaacagtctgccgggccacatgtcggtatgcaccaaccgagtcaaatcctg
cagcgtggcttagtgctgcagagccacatgaccatgggcaatggatctcaaatgatcaac
cagcagagtccagtcaagccccaaaacccagttgagcagcaggcaatttcccaagcctcg
caagcacaacagaggcacaccccgtccaccaccggccactccatccagcagagcctgtta
aggaacgagatggcgcgaatacctgatcgctgcaaccaatcgatctctccgcaggaagcc
cagcctccccaagccaatgtgccaccattttacaagcagcacagcaacaccaccaccgag
gactacctgactccctcttccaaacacagctactcttccgggcacgataatacgcccaag
cattacctccacctgaagaatgaacacccctacctgaccccatccccagagtcgcctgaa
cagtggtccagtccatctccacattccatgtctgattggtcagactccacccccagccca
gctataattggacatcaagttcaaatgcagcatatgactgaacaagcaaccaaaatgcaa
gtttttgcgtaa
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integrated database retrieval system
