Scyliorhinus canicula (smaller spotted catshark): 119957289
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Entry
119957289 CDS
T11175
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119957289
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119957289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119957289
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Transforming growth factors (RSTK binding)
119957289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
119957289
NCBI-ProteinID:
XP_038641052
LinkDB
All DBs
Position
26:20384545..20392850
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AA seq
412 aa
AA seq
DB search
MCGWLSARAPALLTVLLCASVRGVPSWERSRPGERPPAGAQEDPSSQRARGSRGPGWYPV
YMIQLYRAVTGRGARDISDPEQAAIQQADEVVSLLAKGWNHTGDSWIIDFDITSIAHRAW
VQFAELRIQLPPFSACRNTTVLINHSHGYRCGGNRTCQGRAPLGSFTANPSAAGSKWKVF
NITGLLNSWLSQESPPHQVPGRQGLRPPLSADCREGEGHQQRLRERFAKLAAGSRRKPPH
GSAEQIMMVVFFRRNKTEAGGISSTLMRTVARSKFQAAARGGEDGNSRRHKRNRKERLTV
GNSTAGGDHSLCRRVDMEVNFDQIGWGGWVIYPKTFNAYRCVGECPSPLDETFMPTNHAY
MQSLLKSLQPERVPCTSCVPVRMSPLSMLYYKDWEVVLSHHKDMIVEECGCH
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctggctctcagccagggcgcctgccctgctcacggtgctgctctgtgcctct
gtccggggggttccgagttgggagaggagccggcccggggagcgccccccagcaggagca
caggaggatcccagcagccagagagccagaggcagccggggccctggctggtaccctgtc
tacatgatccagctataccgggcagtgacaggcagaggagcccgggacatctctgaccct
gagcaggcagccatccagcaagcggatgaagtggtcagtctcctagccaaaggttggaat
cacactggagacagttggatcattgacttcgacattacctccatcgctcaccgtgcctgg
gtgcagtttgctgagctcaggatccagctgcccccgttctccgcctgtcgcaacaccacg
gttctcatcaaccacagccacggctacagatgcggcggcaacaggacgtgccagggccgc
gcgcctctcggttccttcaccgccaacccttccgccgctggctcgaagtggaaggtattc
aacatcactggcctcctcaacagctggctgagccaggagtcccctccgcaccaggtgcct
gggaggcagggtctccgcccacctctgtccgccgactgccgggagggtgaggggcaccag
cagcgcctgcgggagaggttcgccaagctggcagcgggcagccggaggaagccccctcac
ggcagcgcggagcaaatcatgatggtggtgtttttcaggaggaacaagacggaggcagga
gggatctcctccaccctcatgaggaccgtggcacgctccaagttccaagcggctgccagg
ggtggcgaggatggcaacagcaggagacacaaacgaaacaggaaggaaagactgactgtg
ggcaacagtaccgcagggggcgaccactccctgtgtcgacgggtggacatggaggtcaac
tttgaccagatcggctggggaggatgggtcatctatcccaaaaccttcaatgcctacaga
tgtgtgggagaatgcccctctcccttggacgagactttcatgccaacgaaccatgcctac
atgcagagtttgctgaagtccctgcagccggaacgtgtgccctgcacctcgtgtgtgcca
gtaaggatgagccccttatccatgctctactacaaggactgggaggtggttctgagtcac
cacaaggacatgattgtggaggagtgtggctgtcactga
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