KEGG   Scyliorhinus canicula (smaller spotted catshark): 119957320
Entry
119957320         CDS       T11175                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03015  mRNA surveillance pathway
scau04261  Adrenergic signaling in cardiomyocytes
scau04382  Cornified envelope formation
scau04530  Tight junction
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119957320
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119957320
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    119957320
  09158 Development and regeneration
   04382 Cornified envelope formation
    119957320
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:scau01009]
    119957320
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scau03019]
    119957320
   03036 Chromosome and associated proteins [BR:scau03036]
    119957320
Protein phosphatases and associated proteins [BR:scau01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     119957320
Messenger RNA biogenesis [BR:scau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     119957320
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     119957320
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Nucleoporin_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 119957320
NCBI-ProteinID: XP_038641130
LinkDB
Position
26:complement(732221..820892)
AA seq 462 aa
MRIHKRIRVLRTMKCFPCHFSQSIKSSFSSLNTLMSTASYDQADIISTVEFNHSGELLAT
GDKGGRVVIFQQEQENKSQPHCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQ
NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPATVTTLKVPVFKPMDLMVE
ASPRRIFANAHTYHINSISVNSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEEL
TEVITAAEFHPNQCNTFVYSSSKGTIRLCDMRAAALCDKHAKLFEEPEDPSNRSFFSEII
SSISDVKFSHSGRYMMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDK
FECCWNGCDSVVMTGSYNNFFRMFDRNTKRDITLEASRENSKPRAILKPRRVCSGGKRKK
DEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDKVN
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagaatccacaagcgcattagagtgctgcggacgatgaaatgtttcccctgtcatttc
tcccagtcaattaagtcgtctttctccagcctaaatacgctgatgtccactgcatcctat
gaccaagctgatattatttccacagtagaattcaaccactctggagaactactagcaact
ggggacaaggggggaagagtcgtcatattccagcaggagcaagagaacaaaagtcagcct
cattgccgaggtgaatacaatgtttacagtacttttcaaagccacgaacctgaatttgac
tacttgaaaagtttagaaattgaagaaaagatcaataaaattagatggttaccccaacaa
aatgctgcacagttcttgctctcgacaaatgataaaacaataaagttgtggaaaatcagt
gaaagagacaaacgaccagaaggttataacttgaaagaggaggatggtagatacagggac
cctgccacagtcactacacttaaggttccagtattcaaaccaatggatttaatggttgaa
gcaagccctcgaagaatatttgctaatgcgcacacatatcatataaactctatttcagtc
aatagtgactatgaaacttacttatcagcggatgatcttaggattaacctgtggcattta
gaaatcacagacagaagttttaatattgtagatatcaagcctgctaacatggaggagctg
actgaagtgattacagcagcagagttccaccctaatcaatgcaacacatttgtatacagc
agcagcaagggaaccattcgactgtgtgacatgcgagcagctgccctatgtgacaaacat
gccaaattgtttgaagaacctgaagaccccagtaacaggtcctttttctcagaaataatt
tcttcaatatcagatgtcaaattcagtcacagtggtcgctacatgatgacacgagattac
ctatctgtcaaaatctgggacttgaatatggaaagcagacccgtggagacataccaggtg
cacgaatacctccgaagcaaactgtgctcgctatatgaaaacgactgtatttttgacaag
ttcgaatgttgttggaatggttgtgatagtgttgtcatgactgggtcgtacaacaatttc
ttcagaatgttcgacagaaacacaaaacgggacattacgctagaggcctcgagggagaac
agcaaaccccgggcaatcctgaaaccacgcagggtgtgttcagggggcaagaggaagaag
gacgagattagtgttgacagtctggacttcaacaagaagatcctgcacacggcctggcat
cctaaggagaatatcatcgccgtagccacaaccaacaatctgtatatattccaggacaaa
gtgaattaa

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