Scyliorhinus canicula (smaller spotted catshark): 119957421
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Entry
119957421 CDS
T11175
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04519
Cadherin signaling
scau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119957421 (pals1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119957421 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119957421 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
PDZ domain-containing proteins
MAGUK family proteins
119957421 (pals1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119957421
NCBI-ProteinID:
XP_038641404
LinkDB
All DBs
Position
2:115729230..115870849
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AA seq
671 aa
AA seq
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MTTSHMNGHVAEGSDNEAKNIDLSSHDEPPRHREMAVDCPDDLGSRTMPIRRSAQLERIR
QQQDDMRRRREEEGKKQEFDLNSSIRLKKLAQVQPKVGIDNPTFEDILEGPSNTVKVLEL
DELLSSLKQIQHSLVDTQSQDDVALILQLVQNQDFQNAFSIHNTVAIHMHKMSPPYPVNA
NAQELSQEVQKILTISHQKDGQELGALLASPHFEALLLAHDGVAQQEMLLEPTTEEHAYE
RVAEYGGETVKIVRIEKARDIPLGATVRNDVESVIISRIVKGGAAEKSGVLHEGDEVLEI
NGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQTKNPPAKEMVVHVKSHFDYDPSDDPYI
PCRELGLSFQKGDVLHVISQEDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIE
EDKEPEKSGKLWCAKKNKKKRKKVLYNANRNDDYDNDEILTYEEMSLYHQPASRKRPIVL
IGPPNCGQNELRQKLMEREADRFAAAVPHTTRSMRDNEVNGRDYLFVSRQFFETDMASNK
FIEHGEYEKNLYGTSIDSVRQVINSGKICLLNLHTQSLRILRNSDLKPYIIFIAPPSQER
LRAMLTKEGKNPKPEDLRDIIEKAREMEQNYGHYFDAAVVNTDLEKAYQELIRLINKLDT
EPQWVPSTWLR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcacacatgaatggacatgttgcagaggggtcagataatgaggccaagaac
attgacctttcatctcacgatgagccaccaagacaccgagaaatggcagtggattgtcct
gatgacttgggttcacgaaccatgccgattcgtcgaagcgctcaattagagagaattcgg
cagcaacaggatgatatgcgtcgtagacgagaagaagagggaaagaagcaggagtttgac
cttaattcttccattcgactgaagaagcttgcgcaggttcagccaaaggtgggcattgat
aaccctacatttgaagacattttagaaggacccagcaacacagttaaagttctagaatta
gatgagctgctgtcttctctaaaacaaatacagcacagcctggttgacactcagagtcag
gatgatgtggcactcattttgcagctggttcagaaccaggatttccaaaatgctttcagc
attcacaatacagtagccattcatatgcacaagatgagtccaccataccctgtgaatgcc
aatgcacaggagctatcccaggaggtgcagaagattttgaccattagtcaccagaaagat
ggacaggaacttggtgctcttcttgcttcaccacactttgaagcactgcttctagcccac
gatggagtggcacagcaagaaatgctattagaaccaacaactgaagaacatgcatatgag
agagtagcagaatatggaggcgagactgtgaaaattgttcgcattgaaaaagcacgtgat
atcccccttggagctacagtacgcaatgatgtggaatctgtcattattagtcgtattgtg
aagggtggtgctgcagagaagagtggtgtattgcatgaaggagatgaagtccttgaaata
aatgggattgagattcgtggaaaagatgtcaatgaggtgtttgatttgctggcagacatg
catggtacactgacatttgtgctgattcccagtcagcagaccaagaatcctcctgccaag
gagatggtggtacatgtgaaatcccattttgattacgacccttcagatgatccttatatc
ccctgtcgcgaactggggctgtctttccaaaaaggagacgtacttcatgtaataagccaa
gaagaccccaactggtggcaagcttacagagatggagatgaagacaaccagccattagct
gggcttgttccagggaaaagcttccagcaacaaagagaagccatgaaacaaaccattgag
gaggacaaggaaccagaaaaatcaggtaaactttggtgtgctaagaaaaataagaagaag
cggaagaaagtgctatacaatgcaaatagaaacgatgattatgacaatgatgagatcttg
acatatgaagaaatgtcgctgtatcaccaacctgcgagcagaaaacggccaattgttcta
attggcccaccgaactgcggtcagaatgaattacggcagaaactgatggaaagagaggct
gatcgttttgccgcagcagtacctcatacaacacgatccatgagagataacgaagtgaat
gggcgtgattatctctttgtgtcacgccaattttttgaaaccgacatggcaagcaacaag
ttcattgaacatggcgaatatgaaaagaacctgtatggcaccagtatcgattcagtgcgg
caggtgatcaactctggaaagatatgcctgttaaatttgcacacccagtcattgaggatt
ctgcgcaattcggatttaaaaccttatataatcttcattgcaccaccttcccaggagaga
ctgcgtgcaatgctgaccaaagaggggaaaaatcctaagcctgaagatctgcgggatatc
atagaaaaggccagagaaatggagcaaaactatggtcactattttgatgcagctgttgtt
aatacagacttggaaaaagcataccaggagttaatccgcctcataaacaagcttgacaca
gagcctcagtgggttccatccacgtggctgcggtga
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