KEGG   Scyliorhinus canicula (smaller spotted catshark): 119957526
Entry
119957526         CDS       T11175                                 
Symbol
il1b
Name
(RefSeq) interleukin-1 beta isoform X1
  KO
K04519  interleukin 1 beta
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010  MAPK signaling pathway
scau04060  Cytokine-cytokine receptor interaction
scau04217  Necroptosis
scau04620  Toll-like receptor signaling pathway
scau04621  NOD-like receptor signaling pathway
scau04623  Cytosolic DNA-sensing pathway
scau04625  C-type lectin receptor signaling pathway
scau05132  Salmonella infection
scau05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119957526 (il1b)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    119957526 (il1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    119957526 (il1b)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    119957526 (il1b)
   04621 NOD-like receptor signaling pathway
    119957526 (il1b)
   04623 Cytosolic DNA-sensing pathway
    119957526 (il1b)
   04625 C-type lectin receptor signaling pathway
    119957526 (il1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119957526 (il1b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119957526 (il1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:scau04052]
    119957526 (il1b)
   00536 Glycosaminoglycan binding proteins [BR:scau00536]
    119957526 (il1b)
Cytokines and neuropeptides [BR:scau04052]
 Cytokines
  Interleukins
   119957526 (il1b)
Glycosaminoglycan binding proteins [BR:scau00536]
 Heparan sulfate / Heparin
  Cytokines
   119957526 (il1b)
SSDB
Motif
Pfam: IL1
Other DBs
NCBI-GeneID: 119957526
NCBI-ProteinID: XP_038641592
LinkDB
Position
26:11712075..11797073
AA seq 302 aa
MDWQLSQGQNVPAGNREKNRTFSVKRTKDSRLTSPTTCPQIKVPESSPNLTETDGACCRA
ERGSYQLKITGTSSAISAVGSASLSLEQAVMLVLAVEKFKLKLKRPSRDGWVYDGPSLTD
ADLLGNFDALLEDAITCTSYGEVEQAACSFRFMRSEQEHLTDDQDRSLILSENLQLLAMS
LQQSKDAVQLDVRYYKTTPTTEDDLPVVMAISNQNLFLSCVGTQDSPRVQLEKWDRKLQN
ISSTTDLLRFVFFKKVSSSGLHFELESAMYRGWYVSTSRRNRQPIELDEKKNHKRITIFT
AD
NT seq 909 nt   +upstreamnt  +downstreamnt
atggactggcaactctctcaaggtcaaaacgtaccagcaggcaacagagaaaaaaacaga
accttcagcgtcaaacgcaccaaggattcacggctcacgtctccgactacctgcccccag
atcaaggtccccgagagctcgcccaacctaacggagacggatggtgcctgttgccgagcc
gagcgagggagttaccagctgaagatcacgggcacgtcctcggccatctccgccgtcggc
agcgccagcctctcgctggagcaggccgtcatgttagtcctggccgtggagaagttcaaa
ctgaagttgaaacggccctcccgtgacggctgggtatatgacggaccttccctcacggat
gccgacttgcttgggaatttcgatgcgctcctggaagatgccatcacctgcaccagctac
ggcgaagtcgagcaggcggcctgctctttcaggttcatgcggagcgaacaggagcacctg
acggacgatcaggatcgatccttgatcctctcggagaacctccagctcctggctatgtcc
ttacagcagtcaaaggatgcagttcagctggatgtgaggtactataagacgacgccaacc
actgaggatgatttacccgtcgtcatggcaatcagcaaccagaatctattcctctcttgc
gtgggaacacaagacagccccagagtgcagctggagaaatgggacaggaagctgcagaac
atcagcagcaccaccgatctgctccgtttcgtgttcttcaagaaagtctcgagctctggc
ctgcactttgagctggaatcggccatgtaccgaggctggtatgtcagcacctccaggagg
aacaggcaacccatcgagttggatgagaaaaagaatcacaagcggatcaccatcttcaca
gctgattga

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