Scyliorhinus canicula (smaller spotted catshark): 119957787
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Entry
119957787 CDS
T11175
Name
(RefSeq) 5'-3' exonuclease PLD3-like isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00564
Glycerophospholipid metabolism
scau00565
Ether lipid metabolism
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
119957787
00565 Ether lipid metabolism
119957787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119957787
Enzymes [BR:
scau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
119957787
Membrane trafficking [BR:
scau04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
119957787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
His1_capsid
Motif
Other DBs
NCBI-GeneID:
119957787
NCBI-ProteinID:
XP_038641800
LinkDB
All DBs
Position
27:complement(3398247..3437678)
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AA seq
525 aa
AA seq
DB search
MAAGDHRSLHGVRLGSQPGSGERNMKLQLIHQKVKAPQQFTDGKGNRSSWSSGLQKIYRD
AALVLMVIIVLIVLMMVQLLLSPYAHQMDKKARTPGGSIGAADDLEMGWADSCSLVLVES
IPEGMHFDSNSTVNPSIFDGWMKLLSVAEHSVDIASFYWTMQNNDTHTSEPTANQGEKVF
QELKLASGKLTLRIAVSKPSRSQSLKDLHILEESGAKTSVVDMRRLTDGVLHTKFWIVDR
KHVYIGSANMDWRSLTQVKELGTVIYNCSSLAEDLGKIFEEYWTIGGPNSSIPSPWPSNY
STSFNEQSPMELDLDGTPASVYFSSSPLSLCSEGRTDDLTSILSIIDNADKFVYVAVMNY
IPVTVFSHPQRYWPEIDRHLRKVAFEKRVKVKLLISCWPHSNPSMFPFLRSLAALNGSAS
LNVEVKIFVVHSTHKQKKIPYARVNHNKYMVTDKVAYIGTSNWSGDYFEDTAGVGLVINQ
SSSSWRSEGPTVQEQLQSVFERDWSSRYSKVLNSGDKLSRNCKLI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggtgatcacaggtcgcttcacggtgtacggctgggttcccagccaggctcg
ggggagagaaacatgaagctccaactgatacatcagaaggtgaaggctccgcaacagttt
accgatggcaaagggaatcgtagctcgtggagttccgggttgcagaagatctatcgagac
gcggccttggtgctgatggtgatcatcgtcctcatcgtcctgatgatggtgcagttactg
ctctccccctacgctcaccaaatggacaagaaggcccggacccccggtgggtcaatagga
gctgccgacgatctggagatgggctgggccgactcgtgcagtctggtcctcgttgagagt
attccagaagggatgcactttgattccaattccaccgtgaacccatccatctttgacggc
tggatgaagttgctgagcgtggcggaacacagcgttgacattgcctccttctattggaca
atgcaaaacaatgacacacacacctccgaacctacagccaaccagggtgagaaggttttt
caggaactcaagttggcctcgggaaagctaaccctgcgcatcgctgtcagcaaaccttcg
aggtcccagagcctgaaggacctgcatattctggaagagagcggagcgaagaccagtgtc
gtggacatgcgcaggctgactgacggggttctacacacaaaattctggatcgtggacagg
aagcacgtgtacattggaagtgccaacatggattggagatcactgacccaggtgaaggag
cttggcaccgtcatctacaactgtagctccctggctgaggatctgggcaagatcttcgaa
gaatactggaccataggtggacccaacagcagcatcccatcgccctggcccagtaattac
tccacatccttcaacgaacaatcccccatggaactggacctcgacgggactccagccagc
gtctatttctcaagctcccccctctcattgtgttcggagggacgaacggacgacctcacc
tccatcctcagcatcatcgataacgcggataagtttgtttacgtggcggtcatgaattat
attccagtgacagtcttctctcatccccaaaggtactggccagagattgacagacacttg
cggaaggtagcgtttgagaagagggtgaaggtgaaactcctcatcagctgttggccgcac
tccaacccctccatgttcccgttcctccgctcgctggcagctctgaacgggtcggcgtcg
ctaaatgtggaagtgaaaatcttcgtggtccattcgacgcataagcaaaaaaagatcccg
tacgcacgggtcaatcacaacaagtacatggtgacggacaaagtggcctacattggaacg
tccaactggtctggtgactactttgaggacacagcgggcgtgggcctggtgataaaccag
agcagttcgagctggcgttccgagggcccgactgtgcaggaacaactacagagcgtgttt
gagcgagactggtcgtctcgttacagcaaggtgctgaatagcggggacaaactgagtaga
aactgtaaacttatctaa
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