Scyliorhinus canicula (smaller spotted catshark): 119957795
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Entry
119957795 CDS
T11175
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119957795 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119957795 (snrpa)
Spliceosome [BR:
scau03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
119957795 (snrpa)
Complex B
119957795 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
119957795
NCBI-ProteinID:
XP_038641823
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All DBs
Position
27:11698196..11708140
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AA seq
278 aa
AA seq
DB search
MSVQETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKKEKRKVKAPEPSG
NKKASAPPTANAVPLPVSGMPMMNQAPRMMQMPGQPHYMPPPGMMPPPGMAPGQMPPGSI
PPGQMMAGQMPLPAQTVPENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRH
DIAFVEFDNEVQAGAARDALQGFKITQSNAMKISFAKK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaagaaacccgcccgaatcacaccatctacatcaacaacctgaatgaaaag
atcaagaaagatgagttgaagaaatcgctctacgccatcttttcccagtttggccagatt
ctcgacatccttgtctcccggaacctaaagatgcgaggacaagcctttgtgatattcaaa
gaagtcagcagtgccactaatgctctaagatcgatgcagggtttccccttctatgacaag
ccaatgcgaattcagtacgctaagactgattccgatattatcgctaagatgaagggcacc
ttcgtggagcgtgaccgcaagaaggaaaagaggaaggtgaaagcgcctgagccttctggc
aacaagaaggcttcagcacccccaacagccaatgctgtaccccttcctgtctcgggtatg
cccatgatgaaccaagccccgcggatgatgcaaatgccaggacagcctcactacatgccc
ccgcctggtatgatgcccccgcctgggatggcacctggccagatgccaccaggttccatt
cctcctggccagatgatggctggccagatgccactccctgcccagacggtgcctgagaat
ccacccaatcacatcctgttcttaaccaacctgcccgaggagaccaatgagctgatgctg
tccatgcttttcaatcagttccctggatttaaggaagtccgtctggtacctggtcgccac
gacatcgcctttgtggaatttgacaatgaggtccaagcaggagcagcacgcgacgcgctc
caagggtttaagatcactcagtcgaacgcaatgaaaatctcctttgccaagaaatga
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