Scyliorhinus canicula (smaller spotted catshark): 119957867
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Entry
119957867 CDS
T11175
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1 isoform X1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119957867 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119957867 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119957867 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
scau03029
]
119957867 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119957867 (si:ch211-11n16.2)
Membrane trafficking [BR:
scau04131
]
Autophagy
Other autophagy associated proteins
Others
119957867 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
119957867 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119957867
NCBI-ProteinID:
XP_038641956
LinkDB
All DBs
Position
27:complement(19032610..19057145)
Genome browser
AA seq
651 aa
AA seq
DB search
MSSSLLKEVGELDINTENCKSFLLVDENETLQVMEEESFLERLGIPSNKAVKVLSIFGNT
GDGKSHTLNATFFNGHEVFRTSETQDSCTVGVWAAFDPSLSLILLDTEGLLGATSKQNQR
MRLLLKVLAVSDMVVYRTRAERLHNDLFRFLGNASQAYLKHFTSELKAMSDRCGLEVPLS
SLGPALLVFHETSNTKLLGCDSRTPGGAEQLLQKRFHQLSLSTEAFNSVEYVGTRTTLPP
TNFSGFLEVVCRRASNTSTRSRRPPAIVYNVLKALSMRFNGEITDDRITTSSFFPDEYFS
CSNVCLSCGARCTKNMNHLKDNVAHTAKSRCRYTHQYNNKVLICRVCYERGLEVAVNPKT
SASTDSKWFGLATYAWSGYVLECSTCGIIYRSRQHWIGNQDPEGSVVRPELRHVWLGNEA
FLKDNSNGTQRVLDGVNFAIQSVTDYSRGPTKAITAWLTDQVAPEYWRPNSQITECHQCK
KPFEDGERKHHCRSCGEGCCDVCSTKTMSVPERGWGSAAVRVCDDCFRTGGNSTDVAGKQ
LEAAREGRGLMARRITEVAQSTLDAMTSAVEYPLGIVKDVARPDYWVPDHELVKCHHCEK
PFAGTTAKHHCRACGLGFCSQCSPELRPVPSRGWDHPVRVCVDCSEKKGEL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgttactgaaggaggtgggagagctggacatcaacacagagaactgcaaa
agttttctcctggtagatgagaatgaaacattacaggtgatggaagaggaaagtttcctg
gagaggctggggattcccagcaacaaggccgtgaaagtcctttccattttcggcaatacg
ggggatgggaaatctcacactttaaacgccaccttcttcaacggccacgaggtattccgc
acctcggaaacccaggactcctgcaccgtgggggtgtgggctgccttcgacccctcgctg
tccctcatcctcctggacacggagggcctgctgggggccaccagcaagcagaaccagcgg
atgaggttgctgctgaaggtgctggcagtctccgacatggtggtgtaccggactcgggcc
gagcggctacacaacgacctcttccggttcctgggcaacgcctcccaggcctacctcaaa
cacttcaccagcgagctgaaggccatgtccgaccgctgcggcctggaggtgcccctgtcc
agcctggggcctgcactgctcgtctttcacgagacctccaacaccaagctgctgggctgt
gactcccggaccccaggaggtgccgagcaactgctccagaagaggttccaccagttgagt
ttgagcaccgaagccttcaactcggtcgagtacgtgggcaccaggaccaccctgccaccc
accaacttcagtgggtttttggaggtggtgtgcaggcgggcaagcaacacgtccacccgc
tctcggaggccgcccgctatcgtctacaacgtattgaaggctctgagtatgaggtttaac
ggggagattacggacgatcgaattacgaccagctcgttcttccccgatgaatacttcagc
tgctccaacgtctgtctgagctgtggggctcgctgtacaaagaatatgaaccacttgaag
gataatgtcgctcacactgcaaagagccgatgtcgatacacccatcagtacaacaacaag
gttctgatctgccgggtgtgctacgagcgtggcctggaggtggctgtcaatcccaaaacc
tccgcatcaacggacagcaagtggtttggattagcaacgtacgcctggtcagggtatgtc
ctggaatgttcgacctgtggcattatttaccgtagcagacagcactggattggaaaccag
gatccggaagggtcagtcgtacgtcccgagttaagacacgtgtggctcgggaatgaggcc
ttcttgaaggataatagcaatggaactcagagagtattggatggtgtcaactttgcgatc
cagtcggttaccgattacagtagaggcccaaccaaggcgatcacagcctggttaacagat
caggtggctccggaatactggaggcccaattcacagatcaccgaatgccatcagtgcaag
aaaccttttgaggatggagagcgtaaacatcactgtcgctcctgtggagagggttgttgt
gacgtctgctccaccaaaaccatgtctgtcccggaacggggatggggtagcgctgctgtc
agagtctgtgacgattgcttcagaacaggtgggaacagcacagatgttgcaggaaagcag
ctggaggcagccagggaaggcagggggctaatggctcgcaggattaccgaagtggcgcag
agcacgctggatgccatgacttcagcagtcgaatatcccctcgggatcgtcaaggatgtg
gcgaggccggattactgggtgccagaccacgagctcgtcaagtgtcaccactgtgagaag
cccttcgctgggacgacggcaaaacaccactgccgggcctgtggcctaggcttctgcagc
cagtgctccccagagctgaggccagtaccctcgcgggggtgggaccatccagtcagggtc
tgcgtggactgcagcgagaagaaaggggaactttga
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