Scyliorhinus canicula (smaller spotted catshark): 119957884
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Entry
119957884 CDS
T11175
Name
(RefSeq) WD repeat-containing protein 20-like isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119957884
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
119957884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
NBCH_WD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
119957884
NCBI-ProteinID:
XP_038641986
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Position
27:13747845..13759769
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AA seq
589 aa
AA seq
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MAAEGGGKELNDIKSQFRTREGAYQLLSLSEYSRPNRVPLSAAQGTNPVRVSLVNVREPS
AGGQRICFNVGRELYLYLYRGPRKAADLSKPIDKRIYKGTQPTCHDFNQFTATPDSVSLV
IGFSAGQVQYLDPIKKETSKLFNEERFIDKTKVTCLKWMPESECLFLVAHTSGNLYLYNV
EHPCGTTAPHYQPLKQGPGFAVYTCKSKSSRNPLLKWSVGEGALHEFAFAPDGKHVACAS
QDGSLRVFHFDSMELYGAMKSYFGGLLCVCWSPDGRYIVTGGEDDLVTVWSFWDCRVIAR
GHGHKSWVSVVAFDPYTSSVDDGEQPEFSGSDEDFQEHAPFGRNRTNSTLSRLSKHNSTD
GRATNVTYRFGSVGQDTQFCLWDLTEDILFPHQPLSRARTHTNVVNTAVPGSLSCGSHSG
GLALEANLTNSIPHSLSRSNSLPHPAVTNANSKAHATDGGGSFSISKFATLTLHERKDKS
AEKDHKRNHSIGHIISKSNDKLNLVTRNKLDSAKTLGTTLCPRMDEVPLLEPLVCKKIAH
ERLTVLIFLEDCIVTACQEGFICTWARPGSAVGTESSKFAQWDRGVAGV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggcggcgggaaggagctgaatgatatcaagtctcagttccggacccgg
gagggagcctatcagctgctcagtctgtccgagtacagccgccccaaccgggtgccgctc
agcgccgcccagggcaccaacccggtccgggtgtcgctggtcaacgtccgcgagcccagc
gccggcgggcagcgcatctgcttcaatgtgggccgcgagctttacctctacctgtaccgg
gggccgcgcaaggcggcagatttgagtaagcccatcgacaagcgtatctacaaagggacg
cagcccacctgccatgattttaaccagttcaccgccacgcccgacagtgtctcgctcgtg
atcggcttctcggccggccaagtccagtatctggatccaatcaagaaagagaccagcaaa
ctgttcaatgaagagagatttatcgacaagaccaaggtgacctgcttgaaatggatgcca
gagtccgagtgcctcttccttgtcgcccacaccagtggcaacctctacctctacaatgtg
gagcacccatgtggcaccaccgccccccactatcagccactgaaacaggggcctggcttc
gccgtgtacacctgcaaaagcaagtcgagccgcaatccgctactcaaatggtcggttggc
gagggcgccctccacgagttcgccttcgcccctgatggcaaacacgtggcgtgtgccagt
caagacggcagcctgagggtcttccacttcgactcgatggagctgtacggcgccatgaag
agctactttgggggcctcctgtgcgtgtgctggagcccggacggcaggtacattgtgact
gggggcgaggacgacctggtgacggtctggtccttctgggactgccgggtcatcgctcgg
ggccacggccacaagtcctgggtcagcgtggtagcctttgacccttacacaagcagcgtc
gatgacggggagcagccagagttcagcggcagcgacgaggactttcaggagcatgccccg
tttggccgcaatcgaaccaacagcactttatccagactctccaagcacaattcgacggac
ggccgggcaacaaacgtgacttaccggtttggctccgtggggcaggacacccagttctgc
ctgtgggatttgacggaagacattctgttcccccatcagcccctctcacgagctcggacg
cacacaaatgtggtgaacacagctgtccccggctccctgagctgtggaagccactctggt
ggcctggcgctggaagccaacctgaccaactccatcccgcactcgctgtcccggtcaaac
agccttccacacccggccgttacgaacgccaacagcaaggcccacgcgacggacgggggc
ggatccttcagcatcagcaagtttgcgacactgacactccacgagcgcaaagataaaagt
gcagagaaggaccacaaacggaaccacagcatcgggcacatcatcagcaagagcaacgac
aagctcaacctggtcacgagaaacaaactcgattcagcaaagactttggggaccactttg
tgtccccgcatggacgaggtgcccttgctggagcctctggtctgtaaaaagattgcacac
gagagactaacggtgttgatattcttggaggactgcatagtcactgcttgccaagaaggc
ttcatttgcacatgggcaaggccagggtctgctgtcggcacagaatcaagcaaattcgcc
cagtgggaccgtggtgtagctggcgtctga
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