Scyliorhinus canicula (smaller spotted catshark): 119957925
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Entry
119957925 CDS
T11175
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119957925 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119957925 (snrpd2)
03032 DNA replication proteins [BR:
scau03032
]
119957925 (snrpd2)
Spliceosome [BR:
scau03041
]
Complex A
U1 snRNP components
Sm proteins
119957925 (snrpd2)
U2 snRNP components
119957925 (snrpd2)
Complex B
U1 snRNP components
119957925 (snrpd2)
U4/U6.U5 tri-snRNP components
119957925 (snrpd2)
Complex C
U2 snRNP components
119957925 (snrpd2)
DNA replication proteins [BR:
scau03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
119957925 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
119957925
NCBI-ProteinID:
XP_038642053
LinkDB
All DBs
Position
27:complement(16238693..16250544)
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AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaacaagcccaagagtgagatgactcccgaggagcttcagaagcgagag
gaggaagagtttaacacaggacctctctctgttctgacgcagtccgtcaaaaacaacaca
caggtcctcatcaactgtcgcaacaacaagaagctgctcggccgagtcaaggccttcgac
agacattgcaacatggtgttagaaaacgtcaaagagatgtggaccgaagtgcccaagagt
gggaaaggcaagaagaagtcaaaaccggtcaacaaggaccgatacatctcgaagatgttc
ctccgaggggactctgtgattgttgtacttagaaacccattaattactggcaaatga
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