KEGG   Scyliorhinus canicula (smaller spotted catshark): 119957933
Entry
119957933         CDS       T11175                                 
Name
(RefSeq) alpha-actinin-1-like isoform X6
  KO
K05699  actinin alpha 1/4
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04510  Focal adhesion
scau04517  IgSF CAM signaling
scau04518  Integrin signaling
scau04519  Cadherin signaling
scau04520  Adherens junction
scau04530  Tight junction
scau04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:scau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    119957933
   04518 Integrin signaling
    119957933
   04519 Cadherin signaling
    119957933
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119957933
   04520 Adherens junction
    119957933
   04530 Tight junction
    119957933
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    119957933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scau04131]
    119957933
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scau04812]
    119957933
   04147 Exosome [BR:scau04147]
    119957933
Membrane trafficking [BR:scau04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    119957933
Cytoskeleton proteins [BR:scau04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     119957933
Exosome [BR:scau04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119957933
  Exosomal proteins of colorectal cancer cells
   119957933
  Exosomal proteins of bladder cancer cells
   119957933
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_6 EF-hand_7 EF-hand_1 EF-hand_8 XisI MYG1_exonuc
Other DBs
NCBI-GeneID: 119957933
NCBI-ProteinID: XP_038642076
LinkDB
Position
27:20500615..20604384
AA seq 921 aa
MVDYHETNSQLQQLNHGDYMQPEEDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQIE
VIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAE
EIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISW
KDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMLDAEDIVNTARP
DEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQT
KPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAF
MPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDK
EAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVN
ARCQTICDHWDTLGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQ
DMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYDIKLSGVNPYT
SITSESINDKWDKVQQLVPARDQALQAEFNKQQSNEHLREQFASTANIVGPWIQTKMQEI
GRISIEMHGTLEDQLNQLKQYENSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHI
RVGWEQLLTTIARTINEVENQILTRDAKGISQEQLNEFRSSFNHFDKDHTGKLGPEEFKA
CLISLGYDVGNDQQKRTGLMDADDFRALLISTGYSLGEAEFARIMSVVAPNNTEEVSFQA
FIDFMSRETTDTDTAEQVMASFKILAGDKSYITAEELRRELPPDQAEYCIARMAPYRGAD
AVPGALDYMSFSTALYGESDL
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggtcgactatcacgaaaccaactcgcaattgcagcagctcaaccacggagactacatg
cagcctgaggaggactgggaccgcgacctgttgctggacccggcctgggagcgacagcaa
cggaagacatttacagcatggtgcaactcacatctgcggaaggcagggacacagattgaa
gtaattgaagaagatttcagagatggacttaaacttatgctgctactggaggtgatttca
ggagagcggctacctaaaccagagcgtgggaaaatgagggtgcataaaataaacaatgtc
aacaaagcgttggattttattgcaagcaagggagtgaagctggtctccattggagcagaa
gaaattgtggatgggaatgtaaagatgactctaggtatgatctggactatcatccttcgt
tttgccattcaagacatatctgttgaagagacctctgccaaggagggattgctgctgtgg
tgccagagaaagacggcaccatacaagaatgtaaatgtgcagaacttccacatcagttgg
aaagatgggctggcattcaacgcgctcattcataggcacagaccagaacttattgattac
gacaagctgaggaaggatgatccgctcacaaacctgaacaatgcctttgaggttgctgag
aaatacctggatatacccaagatgttggatgcagaagacattgtgaacaccgcccgccct
gatgagaaggctattatgacctatgtctcctgcttctaccatgccttttcaggagcacag
aaggctgagactgcagccaataggatttgcaaagttctggcagtaaaccaagaaaatgaa
catctgatggaagattacgagaaactggccagtgatttgttggagtggattcgtcaaacc
aaaccctggctggagaacagagagcctgagaaaacaatgcaagctatgcagcagaaactg
gaagacttccgcgattaccggcgtgtccacaaacctcccaaagtacaggagaagtgccag
cttgagatcaacttcaacaccttgcagaccaaactccggctcagcaatcggccagcattc
atgccttctgaagggaagatggtatcggatattaataatgcatggcaaggactagagcag
gcggagaaaggctatgaggaatggctgctgaatgagataaggaggctggaaagacttgac
catttggcagaaaaattcagacagaaagccaccattcatgaagattggaccaaagataaa
gaagcaatgttgacacagaaagactatgaaactgccacactggctgacatcaaagccttg
ctgaagaagcacgaggcgtttgagagtgatctggcagcacaccaggacagagtggagcag
atcgctgccatcgcacaggagctcaatgatctggactattacgactctcccaatgtaaat
gcccgctgccagactatctgtgaccattgggataccctgggctctttgacacagagcagg
agggatgccttggagaggactgaaaagctgcaggaaacaattgatcagttgtatctggaa
tatgccaaaagagctgcacctttcaacaactggatggaaggagctatggaagacttgcag
gacatgtttattgtccataccaccgaggaaatccagggcctcattgcagcacatgaacaa
ttcaaagcaacattgccagatgctgacaaagagagagaagccatcctgggcatccacaat
gaaatgatgaaaattgcccagtcctatgatatcaaactgtctggtgtaaatccatatact
tccatcacttcagagagtattaatgataaatgggataaggttcagcagttagtgccagcg
cgggaccaagccttgcaggcagaatttaacaagcagcaatccaatgaacacctgcgtgag
cagtttgcatccacggctaacatcgtcggaccctggattcagacgaagatgcaggaaatt
ggccggatttctattgaaatgcatggcacgctggaagaccaactaaatcaattgaagcag
tatgagaatagtatcatcaattacaaacccaacattgagaaattggagcaggaccatcag
ctcatccaggaggcgctcatctttgataacaagcataccaactacaccatggagcacatc
cgggttggctgggaacagctgttgaccacgattgccagaactattaacgaagtagaaaac
caaatcctcacccgtgatgcaaaaggcatcagccaggaacagctcaacgagttccgatcg
tcattcaatcactttgacaaggaccatactgggaaactgggacctgaagagtttaaagcc
tgccttatcagcttgggctacgatgttggaaatgaccagcagaagcgaacggggctgatg
gacgctgatgattttcgagctctccttatctctacgggctacagtctgggtgaagcagag
tttgcacgtataatgagtgttgttgcccccaacaacactgaagaagtgtcattccaagcc
tttattgacttcatgtcacgagagacaacagacactgatacagctgaacaagtcatggcc
tccttcaagatcctggcaggagacaagagttacatcaccgcagaggagctgcggcgtgag
cttcctcctgatcaagctgaatactgtatcgcccggatggctccgtatagaggagctgac
gcagtacctggtgctctggattacatgtccttctccactgctttgtatggtgaaagtgac
ctgtaa

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