Scyliorhinus canicula (smaller spotted catshark): 119958097
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Entry
119958097 CDS
T11175
Name
(RefSeq) bromodomain adjacent to zinc finger domain protein 2B-like
KO
K15224
bromodomain adjacent to zinc finger domain protein 2A
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119958097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119958097
03036 Chromosome and associated proteins [BR:
scau03036
]
119958097
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
119958097
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Chromatin remodeling factors
NORC complex
119958097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
119958097
NCBI-ProteinID:
XP_038642254
LinkDB
All DBs
Position
28:10807557..10911683
Genome browser
AA seq
1391 aa
AA seq
DB search
MEVNDQIHFACRMSTPAVSVLKTPPYQEDSLHTNGITMSSTQLGRAMNGELNVNGVTLDS
GASTSEVFAPAAPTLEMRDSHPNSMSGYDFFWDCGQYQSTGIEKLKEKVMLSQLPSQGQH
QSNGPFETTVKEVPIEHSTMPKNLKLCDDRTHNSTGLHFDPYSLCCAQKIHFDMVQEPSS
FSTNHGLTRTMSEEDQSFTYPYDHQYEHCNSQPDIVDLEDADLDLFCSKDYEEVVELEEK
DSESRQSSSCIESKMEEPKMPSNQDISINPFFDCAGDHSLENSITFNIPLKEFPHDPASV
VVMPYTSSYFMELTGESDNELNDCHDAEVKMSLKQDVSAFSISDSTLAPSLESLNLFKSS
LSETQTPASLLMSPRTSSPRKDLTVSDSETDECEDPDAAAVKILSKLVMSTLTLSDADAD
GTGAPDGASTCSLESSTLFKTPVKKAKKKASVPMTPPTPSSSATRKGECIRRRVTDEREL
RIPLQYGWRREIRIKTAECRLQGETTYFAPCGKRLRQFPEVIKYLVRNAVTEVSREHFSF
SPRMNVGEFFEAQDCSEGVQWCKLNAEEIPLRIKAMMGRRGRPPNPNKQRVPKQPKVKRG
KGRPPKVKAVIFLNNTELKFMKRIESQAVLNEKEKQKLRALLNKLKQKGQAKPRPERKLK
KAQRVKMDQKAKQVKKRQKLKRRQQKLQLRQEMKKPTEDLYLTDHKPLPEFAPIPGLVLS
GRAFSDCLTVIEFLHNYGKVLGFDTSKDVPSLNTLQEGLLNVGDNMGNIQDLLIRLLQIA
VLNPGMPHKYQSVTFLGEQICDIGINRDNVSEVLRIFLEAYGAEAELCEGLKSKSFQAHC
SEKKAAVLAFLANELLGSSVVIREIDKNIDHRANIRRNKWIVDGKLRRLKRALAKKKGIR
EPNGIVDGRRRKKDLGSDEGHSGNADGKGQEENAKEETKEKPLERRTDGTNKMDDHPCTS
AAELNRQIEKLSKRQTFFARKLLQVSQTLRALLLGQDRFRRRYWVFPHLCGVFVEGSEAS
LGKGPEDSRTTNMVPLFKKGSRAKPGTEELEAERSQCKSIESALVKVESTDVPARKPSTL
GQPADKRQGKFDTEVVNPENAMWQRVAANAKLYGDAVQNSHSTNQTHHNVDQSGVFLAWL
SVLQNSVSNLSLPTPHCSGSKDGPGALSPEMLLASNRKLFDLSIPNSEQKVKECAEKHGQ
WFSLLPRKPCDPSSVTRLPFSSHHALLNQPPRLDSDPSQLNHSALKSPTAVARAQSTDSL
DLTTPHGTPIAASLQASSNAAKAKVKSHHCDGALQVECPLPRTPRRRGRPSKLQKEINQR
QLQPIPPGEMLNVTLFCWARLVCGGVTLTHRMDYSVINLLRPEGVAHVWRLSIKNSEVQQ
TIETTLKLKNL
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatgatcagatccactttgcctgccgcatgtcgacacctgctgtctcagtc
cttaagactccaccttatcaggaagatagcttgcacacgaatgggatcaccatgagctca
acacaattaggcagagctatgaacggtgaactgaacgttaatggtgtaacccttgactca
ggagccagtacgtcggaggtctttgctccagcagcaccaacccttgaaatgagagactcc
cacccgaactcaatgagtggatatgactttttctgggactgtggacagtaccagtcaaca
ggtatcgagaaactcaaagaaaaagtgatgctgtcccagctgccttctcaagggcaacac
cagtcaaacggtcctttcgaaactacagtcaaagaagtcccaatcgaacattctacaatg
cccaaaaacctgaagctatgtgatgacaggactcacaactctactggcttgcattttgat
ccttacagcctgtgctgtgctcagaaaattcattttgatatggtgcaagaaccatcatcg
ttctccacaaaccatgggcttactaggaccatgtccgaggaggatcagtccttcacgtat
ccctatgatcaccagtatgaacactgtaactcccagccggacattgtagacctagaggac
gccgacctggacctcttctgcagcaaagattacgaagaagtggtggagttagaggagaaa
gattcagagtccaggcagagctccagctgcatcgagtcaaagatggaggaaccaaaaatg
ccgtcaaaccaagacatctctatcaatccgttctttgactgcgctggtgaccactctcta
gaaaactccataaccttcaacattccactcaaggaatttcctcatgatccagcctcagta
gtagtgatgccatacacctcatcctatttcatggaactcactggtgagtctgataatgaa
ttgaacgattgccacgatgcagaagtgaagatgtctctgaagcaggacgtctctgccttc
tccatctccgactccacacttgctccttctctagaaagcttgaatcttttcaaatcgtcg
ctcagtgaaacgcagacaccagcctcccttctgatgtctccacgcacatcatcgccaaga
aaagatttaactgtctcggatagtgaaactgatgagtgtgaggatcccgatgctgcagcc
gtgaaaatcctttcgaaactggtcatgtcaactctcacgctgtccgacgctgatgccgat
ggcactggggcccccgatggcgccagcacctgctctctagaatcctcaacgctcttcaaa
acccctgtgaagaaggcaaagaagaaggcctcggtaccgatgacgcctcctacaccatca
tcctctgctacgcgtaagggcgaatgcatacgtagaagagtaactgatgaacgcgaattg
cgcattccactgcaatacggatggaggcgtgagatcagaataaaaacggccgagtgccgc
ctgcaaggggaaaccacatattttgccccctgtggaaagaggctacgtcagttccctgaa
gttattaagtacctggttcgaaacgcagtgaccgaagtcagtcgggaacatttcagtttc
agtccccggatgaatgtgggagagttttttgaagcacaagactgctctgagggcgtgcag
tggtgtaagcttaatgcagaagaaatccctttacggattaaagccatgatgggcagacga
gggcgaccgccaaatcctaacaagcagcgagtcccaaaacagccaaaggtcaagcgaggc
aaaggaaggccaccaaaggtcaaggcagtgatattccttaataacaccgagttaaaattc
atgaaaagaatcgaatcacaagctgttctgaatgaaaaagagaagcagaagctgagagcc
ttgctgaataaattgaagcaaaagggacaggccaaaccccgaccagagcggaagctgaag
aaagcacaaagagtaaaaatggatcagaaggcgaagcaggtgaagaagcgacagaaactg
aaacggagacagcagaagctgcagctccggcaggagatgaagaaacccactgaagacctg
tacttaaccgatcacaagcctttaccagagtttgcccctattcctggcctggtgctttct
ggccgtgccttttcagactgtctcacagtcattgagtttttgcacaactatggcaaggta
cttggtttcgataccagcaaggatgtgcccagtttgaacacactccaagaaggcctgctg
aacgtcggggacaatatgggtaatatccaggatctgctgattcgattactccagattgca
gtgctcaatccagggatgcctcataaataccagtcagtaacgtttctcggggagcagatc
tgtgacattggaattaaccgggataacgtgtctgaagttctgcggattttcctggaggcg
tacggggctgaagcagagctctgcgaaggtttgaaaagcaaatcattccaggcacattgc
tcggagaaaaaggcagctgtgctggccttcctcgccaatgagctgctggggagcagcgtg
gtgataagggaaatagataaaaacatagaccaccgtgccaacattcggaggaacaagtgg
attgtggacggaaaactgaggaggttaaagagagccctggcaaaaaagaaaggaattcgg
gagcccaacggcattgtggatggcaggagaaggaaaaaggaccttggttctgacgaaggg
cacagcggcaatgcggatggcaaagggcaagaggagaatgcaaaggaggaaacgaaagag
aaaccattggaaagaaggactgacggaacgaataagatggatgatcatccttgtaccagt
gcggctgaattaaaccgtcagattgagaaactcagtaagcgacaaacgttttttgcacgg
aagctgcttcaagtctcccagacactacgtgccttgttattggggcaggatcgttttcgg
cgtcgctactgggttttccctcacctctgcggggtatttgtggaaggctctgaagcatca
ttaggaaaggggccagaggacagcaggacaactaatatggtgccgttattcaagaaggga
agtagggcaaaaccaggtactgaagagttggaagcagaaaggagccaatgcaagagcatt
gagagtgccctggttaaagtggagtcgaccgatgtaccagccaggaaaccaagcaccctg
ggtcagccagcagataagcggcaggggaagtttgacactgaagtggtcaacccagagaac
gcgatgtggcaacgagttgctgcaaatgccaaactttacggtgacgctgtccaaaactcg
cattccaccaatcagactcatcataacgttgaccagtcgggtgtttttttagcctggctg
agcgtcctccagaactcggtgtcaaacctctcccttccaacacctcattgcagcggcagc
aaagatggccctggtgctctctccccagagatgctgctggccagcaatcgcaagctgttt
gatctcagcataccaaactcggagcaaaaggtcaaagagtgcgccgagaaacacggacag
tggttcagccttctacccagaaaaccctgcgacccctcttctgttacccgcctgccgttt
tcttcacatcacgcattgctgaatcaacccccgagactggattcagatccaagtcaactg
aatcacagtgcgttaaagtcccctaccgctgtggcaagggcacagtccacagactcactg
gatctgactaccccacacgggaccccaatcgcagcatctcttcaggccagctccaacgca
gccaaagcgaaggtcaagtctcaccactgtgatggtgctcttcaggtcgaatgcccgttg
ccaaggacacccaggcgccgtgggcgaccatcaaaattgcagaaagagatcaatcagcgc
caactgcaacctattccaccaggtgagatgttgaatgtgactttgttttgttgggcgcgg
ctggtttgtgggggtgtcacactgacacacaggatggattattctgtcataaatctttta
cggccagagggggtagcacacgtgtggaggctctccattaaaaatagcgaagtgcaacag
acaatcgaaacaactttaaaacttaagaacctttga
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integrated database retrieval system
