Scyliorhinus canicula (smaller spotted catshark): 119958103
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Entry
119958103 CDS
T11175
Name
(RefSeq) intermediate filament protein ON3-like
KO
K07605
type II keratin, basic
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119958103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119958103
04147 Exosome [BR:
scau04147
]
119958103
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
119958103
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
119958103
Exosomal proteins of other body fluids (saliva and urine)
119958103
Exosomal proteins of colorectal cancer cells
119958103
Exosomal proteins of bladder cancer cells
119958103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
KIF21A_4th
TPR_MLP1_2
CENP-F_leu_zip
ATG16
Baculo_PEP_C
CENP-Q
CCDC39
TPR
FKBP15
CCDC22_CC
HALZ
MbeD_MobD
DUF7258
Motif
Other DBs
NCBI-GeneID:
119958103
NCBI-ProteinID:
XP_038642259
LinkDB
All DBs
Position
28:complement(17780581..17849672)
Genome browser
AA seq
952 aa
AA seq
DB search
MSSRSFRSRSHFSSQSYTPGSSMQRVSSIRSIPGLGMVGGQRLVALTAGKISLEAPPAFE
GGQAFQELRSREKDQIKGLNNQFARFIDKVRTLEQRNKQLEMHWKLLQEKGARSSNIDGL
FQVYSNNLKQQIDALAQEKHRLQVELDGMQGLVEDYKTKYEDEINLRTERENEFVMIKKD
VDESYLNKVDLEAKLESLTDEINFLKDIFEEEIHDLQAQIKNTAVTVEVDTSRKLDLSSI
LNDVRSQYEGMVVKIRQDTVTSWENKFNDMKKNSGKHADDLRVMKTEISDMQRQVGRLNS
EIQALHKQKEQLEAAIAEAEERGEMALVEAKKRIADLQEAIEKANKEMIRQVREYQDLMN
TKLALDIEIATYKKLLEGEESRLSTPVNVTYHQSTKAGYGLSQLQFDSLNRGGLETSGVN
KSLIVKTIETKDGKTLSESSFYPRKHPYLHQSFSLELQTLSSSLNMSTQKFTSRSSQRRV
GSGISSSSSIGGGGGISSQFSRMSTSRVPRAQSLIQVQRRQMSRPVGVGMSGMSSYGGGR
SSYSRGISQYGYGAGSFGMNQIVNQPVDLSAPLPNIDTSFQTIRLREGQQIMQLNNDFAL
FTCRVRDLEQINKRLEIKLNLLKEQGDYKSNIDNMFQTYIENLRKQLETLGQEKQRFEGD
LLQMQAVVEDFKTKYEDEINKRTEMENEFVLVKKDVDDSYMSKVELEAKLESLTDEIHFL
QSVFEEEINELQAQIQNTSVNVQLESAPTFNAADVIQEAKNKYAALAAAGREEMETFKQS
KIQELSMSSGQCGDELNQIKIDIKNLTTNIRGLNGEIDGLRNQRVILEGKIKDAEENGEL
SLKDAKARIADLQAAINTAQAQLMKQAQEYDALVQIKMSLEIEIGTYRTLLEREEERMSS
GVKTLSIQQVQNQANVQTFNDMSSRLGTTFGQNGALNQTTILKSVEQRRINY
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgctcattccgctcccgcagccacttcagcagccagtcctacacccctggc
tccagtatgcagcgggtcagctccattcgctccatccctgggctggggatggtaggtggc
cagaggctggtcgctctgaccgccggcaaaatctccctggaggctcccccagcgttcgaa
ggtggccaagctttccaggagcttcgaagccgagagaaggaccagatcaaaggcttaaat
aaccagttcgctcgcttcatcgacaaggtgcggacactggagcaacgcaacaagcagttg
gaaatgcactggaagctgttacaggagaaaggtgcgcgcagttccaacattgatggcctg
ttccaagtttattccaacaacctcaagcagcagatcgatgccttggcccaggagaagcat
cgcctacaagtcgagctggatggcatgcaggggctggtggaagactacaagaccaagtat
gaagatgaaatcaacttgcgtacggagagggagaacgaatttgtaatgatcaagaaggat
gttgatgaaagctatctcaacaaagttgacctggaggctaagctcgagagccttactgat
gaaatcaatttcctgaaggacatatttgaagaggaaatccacgatctgcaggcccaaatt
aagaacactgctgttaccgtggaggttgacaccagccgtaaactggacctgtccagcatc
ctgaatgatgtccggtctcaatatgaaggaatggtggttaaaatccgccaagacactgtg
acctcgtgggaaaacaagttcaacgatatgaagaaaaattccggaaagcatgccgatgat
ctccgtgtcatgaagactgaaatttcagacatgcaaaggcaggtcggacggctaaactct
gaaatccaggctctgcacaagcaaaaagagcagctggaggcagcaatcgcagaagcagag
gaacgtggtgaaatggctctcgtggaagctaaaaaacgcattgccgacttacaggaagcc
atagagaaagctaacaaggaaatgattcgccaggtccgagagtaccaagatctgatgaac
actaaacttgccttggacattgaaattgccacttacaaaaaactgcttgaaggagaagag
agcaggttgtcaacaccagtgaatgtgacctatcaccaatcgaccaaagcaggttatgga
ctttcgcagttacagtttgatagcttgaaccgtggagggctggaaacaagtggagtgaac
aaatccctcatcgttaagacgattgaaaccaaggatggcaaaacactctccgagtcctcc
ttttatccaagaaaacacccttacctccaccagtcgttcagtttggaactccagactctc
tcctccagcctcaacatgtctacacagaaattcacgagccgcagcagccagcgccgcgtg
ggcagcggcatcagcagcagcagcagcataggcggcggcggcggcatcagcagccagttc
agcagaatgtccacctctcgtgttcccagagcacagagtctgatccaagttcaaaggcgg
caaatgtcacggccagttggagtaggcatgagtggcatgagcagctacggcggtggccgc
tccagctacagccgcggcatctcccagtatggctacggcgctggcagcttcgggatgaac
cagatagtcaatcaacccgttgacctcagtgcccctctccctaacattgacacctccttt
cagacgatccgtctgcgtgagggccaacagatcatgcagctcaacaacgactttgcctta
ttcacttgccgggttcgtgatctggaacagatcaataagagactggagatcaaactgaat
ctcctgaaagaacaaggagattacaaatccaacatcgacaacatgttccagacttacatc
gagaacctgagaaaacaactggaaacacttgggcaggagaagcagagattcgagggggat
cttctacaaatgcaagctgtcgttgaggacttcaagaccaagtacgaagatgaaattaac
aaacgcacagaaatggaaaatgagtttgtcctggtgaagaaggacgtggatgactcctac
atgagcaaagtggaactggaagccaaactggaaagccttacagatgaaatccacttcctc
caatcagtctttgaagaggaaattaatgagctgcaggcacagattcagaacacatctgtc
aacgtgcaactggagtcggcgcccaccttcaacgctgctgacgtcattcaggaagccaaa
aataagtatgcggcactggccgcagctggccgcgaagagatggagacattcaaacagagc
aagattcaggaactgagcatgtcatctggacaatgtggcgatgaactcaatcaaattaag
attgacattaaaaacctgacaacgaatatccgcgggctgaatggtgaaattgacggtctg
agaaaccagcgtgtgatcctggagggtaaaatcaaagatgcggaagaaaatggtgaactg
tctctcaaagacgctaaggccaggattgcggacctgcaggcggccatcaatacagcgcaa
gcgcagctaatgaaacaagcccaggagtatgatgcgctggtacaaatcaagatgagtctg
gagattgaaattggcacctacaggactctgctggagagagaggaggaaagaatgtcatcg
ggagtaaaaaccctgagcatccagcaagtacagaaccaggctaatgttcaaacgtttaat
gacatgagttcaagactaggaactactttcggacaaaatggtgctttaaaccaaacaact
attttgaaatcagtggagcagaggcgtatcaactactga
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