KEGG   Scyliorhinus canicula (smaller spotted catshark): 119958112
Entry
119958112         CDS       T11175                                 
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04137  Mitophagy - animal
scau04144  Endocytosis
scau04145  Phagosome
scau04148  Efferocytosis
scau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119958112
   04145 Phagosome
    119958112
   04137 Mitophagy - animal
    119958112
   04148 Efferocytosis
    119958112
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119958112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scau04131]
    119958112
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scau04147]
    119958112
   04031 GTP-binding proteins [BR:scau04031]
    119958112
Membrane trafficking [BR:scau04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    119958112
 Endosome - Lysosome transport
    119958112
Exosome [BR:scau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119958112
  Exosomal proteins of other body fluids (saliva and urine)
   119958112
  Exosomal proteins of colorectal cancer cells
   119958112
  Exosomal proteins of melanoma cells
   119958112
GTP-binding proteins [BR:scau04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    119958112
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 119958112
NCBI-ProteinID: XP_038642275
LinkDB
Position
28:complement(1272281..1284514)
AA seq 215 aa
MASRGASRPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALSGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSELQNASGTTGRNKGVDLHEPSQQNKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccagcagaggagcatccaggccaaatggtcaatcccaggccagcaaaatctgccag
tttaaacttgtattgttaggggagtcggctgtgggaaaatccagtcttgtgctacgtttt
gttaaaggacaattccacgaataccaggaaagcacaattggtgctgcatttctcacacaa
tctgtctgcttggatgacacaacagtgaagtttgagatctgggacactgctggacaggag
cgatatcacagtctagctcccatgtactacagaggtgctcaagctgccattgtggtttat
gacatcaccaatcaggaaacattcgcaagagcaaagacctgggtgaaagagttgcagcga
caagcaagtcccaatatagttatagcactgtcgggaaataaagctgatctggctaataaa
aggatggtggaatatgaggaagcacaagcatatgcagatgataacagtttgttgttcatg
gagacatcagcaaagacggcaatgaatgttaatgacttatttttggcaatagccaagaag
ttgccaaagagtgaacttcagaatgccagcggaacaacagggcgaaataaaggtgtggat
ctccatgaaccatctcagcagaacaagagccaatgttgtagcaactaa

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