Scyliorhinus canicula (smaller spotted catshark): 119958174
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Entry
119958174 CDS
T11175
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04145
Phagosome
scau04814
Motor proteins
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119958174
09142 Cell motility
04814 Motor proteins
119958174
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119958174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119958174
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119958174
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
119958174
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
119958174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Dynein_IC2
Beta-prop_CAF1B_HIR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
119958174
NCBI-ProteinID:
XP_038642439
LinkDB
All DBs
Position
28:3420426..3500967
Genome browser
AA seq
526 aa
AA seq
DB search
MLQWDTDLSVLQLQTHSEMRHHLQKLGIARITHVDIAPCERLAHCKETQTPVVAKPDEAK
EELAVPMKASTAAETETPEATQGETKEEAQATQLDLTKEEKENILHSDGFLSFFDQTSRM
IEQALTEHADIFFDYSGRNLDDKEGEVQAGAKLSLNRQFYDENWSKDRVVTCLDWSQQYP
ELLVASYTNNEDALNEPDGVALVWNMKFKKTTPEYIFHCQSKVMSACFAQFHPNLMVGGT
YSGQIVLWDNRSNKKTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLVSVSTDGKLCTWSL
DMLSQPQDSIELVHKQSKAVAVTSMSFPLGDINNFVVGSEEGSVYTACRLGSKAGIFEMF
EGHQGPVTGVHCHTAAGPVDFSHLFITSSFDWTVKLWSTKSNKSLYSFEDSSDYVFDVMW
SPIHPALFACVDGMGRLDLWNVNEDSEVPTASVTMEGNPALHRVRWAQSGREIAVGDSEG
QVLIYDVGEQIAIPRNDEWTSFAQTLVDLKANGNDAEEEAAGGLLA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaatgggatacagatctttctgtccttcaacttcagactcattcagaaatgcga
catcacctgcagaaactaggaatagccagaattacccatgtggatattgcaccttgtgag
cgtcttgcacactgtaaggagacccaaacaccagtggttgcaaaaccagatgaagcaaaa
gaagaactagcagtccccatgaaagcatcaactgcagcagagactgaaacacctgaagca
acccaaggggaaaccaaagaagaggctcaagcaactcagcttgacctgaccaaggaagaa
aaggaaaatatccttcattcagatgggtttttgtccttttttgatcagacctccagaatg
attgagcaagcacttactgagcatgctgacattttctttgactacagtggccgtaacctg
gatgacaaagaaggagaggttcaagcaggggccaagctgtcactgaacaggcagttttac
gatgaaaattggtcaaaggatcgtgttgttacctgtctggactggtcacagcagtatcca
gaactactggttgcttcttacactaataatgaagatgctttgaatgagcctgatggtgtg
gctcttgtatggaatatgaagtttaagaagaccactccagaatatatctttcactgccag
tcaaaagtcatgtctgcctgctttgcacagtttcacccaaatctcatggtgggtggaaca
tattctggtcagattgtcctttgggataaccgcagtaataagaagacaccagtccagcgg
actccactatctgctgcagcccacacacaccctgtgtactgtgtgaatgttgttggaact
caaaatgcccataacctagtcagtgtttctactgatggaaaactgtgtacctggagcctg
gacatgctctctcagccacaggacagtattgaactggtacacaagcaatcaaaagcagtt
gctgtaacctccatgtccttcccgctgggagacatcaataactttgttgtgggtagtgaa
gaaggctctgtctacacagcatgtcgccttggcagtaaagctggaatcttcgagatgttt
gaaggtcatcaaggtccagtgacaggggtccattgtcacacagcggcagggccagtggac
ttctctcatctttttatcacctcatcattcgactggactgtgaaactctggtcaactaag
agtaacaagtccttgtattcctttgaggacagttcagactatgtatttgatgtcatgtgg
tctccaatacaccctgcactctttgcatgtgttgatgggatgggccggcttgatctctgg
aatgtgaatgaagactctgaggttcccactgcaagtgtcaccatggaggggaaccctgcg
ttacatcgtgtacgctgggcacagtcaggacgagagattgctgtgggtgattctgagggc
caagtattgatctacgatgtgggagagcaaattgccattccccggaacgatgaatggacc
agttttgcacaaacacttgttgaccttaaagcaaatggaaatgatgccgaggaggaagca
gcaggaggtctccttgcctag
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integrated database retrieval system
