Scyliorhinus canicula (smaller spotted catshark): 119958231
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Entry
119958231 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 6, transcription factor 1-like
KO
K09368
POU domain transcription factor, class 6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119958231
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119958231
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Motif
Other DBs
NCBI-GeneID:
119958231
NCBI-ProteinID:
XP_038642567
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Position
28:3604558..4014746
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AA seq
468 aa
AA seq
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METGDLTEQHDALSITEQATVMTGQEVSKVSPKKVDVLFKAEADMQSRGIVLPTTVLAEG
NNKSNIPTEAPKIPRGSVQENHCRRSTEPIETIPPSDPTPVSEVQIQQPHLQAQQTVPTS
APTVAQVLTSDNLATMVMASTGSVXINQPLFIPLNMANQGTAQQGLVLTIPXATLASIPG
LTSATVAGSILKLPLANLQAASMLNTALQPPLLQQTFQPQLTLQSLPTSTVPLKEPEAQT
PITPIHTAQGLTLNPTILSSQTSLVGSLTATPVIANAMPSFQGITSQIITNAQGQVIGTV
PLVMNPATITTANPVTAVPAQSLQVQAVTPQMLLNSQGQVIATVISNQFVPVLSRQGVLA
SPVKTTQQVQTFQTMAAVTEPTVTSTTAAAPTEPVTQCNTPSTASVGQLVSKPQSAPTEV
DGINLEEIREFAKNFKIRRLSLGLTQTQVGQALSAAEGPAYSQSAICR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggcgatctgacagagcaacatgatgctttgtctatcactgagcaggccact
gtgatgactggacaagaagtcagcaaagtttcaccaaagaaagtggatgtcttattcaaa
gcagaagctgatatgcaatcccgaggaattgttctcccgacaacagtgctggctgaggga
aacaataaaagcaacattcccactgaggcaccaaaaattcccagaggttctgtgcaggag
aaccactgccgcaggtctactgaaccaatcgagacaataccaccatctgacccaacacca
gtcagtgaagtgcaaatacaacagccacatcttcaagcacaacagactgtgccaacctca
gcacccacagtggctcaggtgttgacttcagacaacttggcaacaatggtcatggcttca
acaggcagtgtcntcattaaccaacctcttttcatcccacttaacatggctaatcaagga
actgcacaacagggacttgtgttgacaattccancagcaactcttgcttctatcccagga
cttacttctgccactgttgcaggaagcatcctcaagcttcctctggcaaacttgcaggct
gcatcaatgttgaatactgcactccaacctccactgcttcaacagaccttccagcctcag
ctcactctacagtcccttcctacatctactgtacctctgaaagagccggaagcacaaacc
ccaatcactcccattcacacagcacaaggcctgactttaaaccccacaatccttagcagt
caaacttcgcttgtgggctctctgacagctactccagttattgcaaatgcgatgcctagc
ttccagggaattacaagtcagatcataactaatgcacaaggacaggtcatagggactgtt
cccttagtcatgaacccagcaacaataacaacagccaatccagtgacggcagtaccagcc
caaagcctccaagtgcaagcagttacaccacagatgctgctgaactcccaaggtcaggtg
atagcgactgtgatcagcaaccagtttgtaccagtcctgagccgacaaggagtccttgct
tcacctgtaaagacaacacagcaggtacaaacgttccagacaatggccgctgtaactgaa
cccactgtgacatcaactacagccgctgcaccaactgaacccgttacacaatgcaacacg
ccctccactgctagtgtgggacagctagtcagcaagcctcaaagtgcacccactgaagtg
gatggaataaacctggaagagattcgtgaatttgcaaagaattttaagatccgtcgactg
tcccttggactgacgcagacccaggttggacaggcactgagtgctgcagagggaccagca
tacagccagtcagccatctgcaggtaa
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