Scyliorhinus canicula (smaller spotted catshark): 119958290
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Entry
119958290 CDS
T11175
Name
(RefSeq) claudin-15-like
KO
K06087
claudin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03272
Virion - Hepatitis viruses
scau04382
Cornified envelope formation
scau04514
Cell adhesion molecule (CAM) interaction
scau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119958290
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119958290
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119958290
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119958290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119958290
04147 Exosome [BR:
scau04147
]
119958290
Cilium and associated proteins [BR:
scau03037
]
Other cilia and associated proteins
Stereociliary proteins
119958290
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119958290
Exosomal proteins of colorectal cancer cells
119958290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
Motif
Other DBs
NCBI-GeneID:
119958290
NCBI-ProteinID:
XP_038642651
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All DBs
Position
29:complement(6647233..6724207)
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AA seq
308 aa
AA seq
DB search
MSRIPGGSRRSSGTNVKICRGGRIAKRKEKTVALPKSEKEEAEIRSETVNPTLTCKVPVD
EKALEALEVVITIGLGGKICKRAKRLEKKTANECLAEIQIQRQARVGFIFRCLLTVFVSG
NPEAAETGQQQSWCKHGGSELTSGISGLPAPDYVRASQALMIISILMGFIAGCVTLFGLR
CTLLGNTDPIVKAKIATAGGALFIVAALCAMVPVSWYAYNVTIQFYDTFYPGTKYELGPG
LYIGWAGGSLELIGGICLCLSCKAARGATGQYTYTYRASRSTPGAGTVSRKLTSEVDNAS
NYGKNAYV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtatcccaggcgggagccggaggtcttcaggaaccaacgtgaagatctgcaga
ggcggtcgaatagcaaagaggaaagaaaagactgtcgcacttcccaagtccgagaaagaa
gaggcagaaataagatcggaaactgtaaatccaaccctgacgtgcaaggtgccagtcgat
gaaaaagccctggaggccttggaggtggtgataaccattgggctgggtggaaagatttgt
aagcgtgcaaaacggcttgagaagaaaacagcgaacgaatgtctggctgagattcaaatc
caacgccaagctcgagtgggttttatatttcggtgtttattgactgttttcgtcagcggt
aaccctgaagccgctgaaacaggacaacaacaatcctggtgtaaacacggcggctctgag
ctgacatcaggtatctcaggccttcctgccccagattatgtgcgtgcctcccaggcccta
atgatcatatccatcctgatggggtttattgctggctgcgtcaccctgtttggcctgagg
tgcaccttattgggtaacaccgaccccatcgtcaaagccaagattgcgacggctggcgga
gctctcttcattgtggcggctctctgcgcaatggtcccagtttcttggtacgcctacaat
gtgacaattcagttttatgatacattttatccaggaacgaagtatgagcttggaccaggc
ctgtacattggctgggctggggggtctctggagctgattggagggatctgcctgtgtctg
tcttgtaaagcggccagaggggccaccggtcagtacacgtacacatacagagcttccaga
tcgacaccgggagcgggaaccgtgtcgaggaaattgacctcggaggtggacaacgccagt
aactacgggaagaatgcttacgtctga
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integrated database retrieval system
