Scyliorhinus canicula (smaller spotted catshark): 119958389
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Entry
119958389 CDS
T11175
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119958389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119958389
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119958389
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
ZSWIM1-3_RNaseH-like
Motif
Other DBs
NCBI-GeneID:
119958389
NCBI-ProteinID:
XP_038642813
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All DBs
Position
29:complement(6777744..6863451)
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AA seq
1396 aa
AA seq
DB search
MPVLRSMKASPSSERVASTSPSSGSGLPRSQYSSPTYFRGEQVAELLVGQDSDTDEVSSE
SESDTGSDFEETLQKGKKKLASVPPRAPEPKRPRYAPAELTETVEKSHRGIQQAASPVAM
TVSVAKSAPQPSRRPRRVLTESSQNLGNETGTTWLDSDRDASHLSVTITQSKNRAQVSRR
PRQVRAEGNRTAGKENSSLYLDSDRETSNVSAGGRRPKGVAQQPRKARQAPGGKAAASEQ
QKEASNLFEAVKLAKSAMQTLVDEWLEVYKLDREAGLLELFNFIIHCCGCKGVVTSQMFR
KLQNAEIIRKMTEEFDEDSGDYPLSMASPMWRKFRQNFCEFIAVLIRQCQYTVLYDEYMV
DTLISLLTGLSDSQVRAFRHTSTLAAMKLMTALVDVALNLNVHQENLQRQYDTERNKAAG
KRANDRLEMLLQKRKELQQNQEEIENMMNAIFKGVFVHRYRDLIAEIRALCMEEIGVWMK
RYSDSFLNDSYLKYVGWMLHDKQREVRLKCLKSLQRLYESRDISPKLELFTNRFKDRMVS
MVLDVDYDVAVEAVRLLTLIFQNADDVLSNEECECVYPLVYASHRPTAAAAGNFVHMKLR
RHYDVEHEETMAKERGKRSVNGEFIKLLLTFFLESELHEHCAYLVDSLWDHAGPVLKDWE
GMTELLLEEIGEDEEGLTDQEESALIELMVCSMRQAVEGHPPIGRTSGKKLLTAKERKQQ
MDDRVRLSEHLIVVIPQLLAKYSADAEKVANLLLIPSFFDLDIYCSRRLEKYLDLLLKQI
RDIVEKHTEKDVLEACSRAYYTLCNEDYTIRNRVDIARSQIVDTLVEIFTQSVEELLHEV
GETDEDNLYTVATSLKRITALYNAHDLTRWDLFDSCCRVLERGIDTGEIPEQIIIQALLC
AHFHILWRLAVISEYPATKEQLIRLRKQRKTVFAVCQHSLSNASTRVREQSFVLLCDLLV
IFSAQLTKDGREELQPLVFTADLPLVSELLSFVMDHVFVEPEEDGDDESLKIEMLHKRRN
FLAGFCKLIIYNMVDLRSAADIFKNYMKYYGDYGDIIKEMLAKARLIDKIECAKTLLLSL
QQLFNELLQDHGSAVNRSSHNFCTIKDLGKRFALTFGLDLIKSRQPVVSLHLDGIKFAFQ
EYQPSAVASAPINLPFLDVLSEFSTKLLRQDKKAVLTYLDKTFPAPLTAIIEAWMPLASY
RRSLLTRGEDDTMSMISGRATSVRSKRAPATSAKRRKLEVSAVSSDGSWPQSAGSLQIHG
KLRTPMLTSTILRPPQWDTGSLQSSDDQDSEKGSDSEFTNSQSWLASQQNKRQSQRIQKN
QQQKNQLRKRVKKQQLLSLMEEDGEESEGGEMISDATSERSDTNSEISLPAPLSRRGRAG
MLQDLFDSSILDIDDF
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctgaggtcaatgaaagcctcccccagctctgagagggtggcgtcaacgtct
ccgtcaagtggttccggactcccgagatcgcagtattccagcccaacctatttccgtggg
gagcaggtggcggaattgctggttggacaggattcggatactgatgaggtgtcgagtgaa
tcggagtcggacaccgggagcgatttcgaggagaccttgcagaaagggaagaagaagttg
gcctcagttccgcctagggctccggagcccaagaggccaaggtatgcaccggcggagttg
acggagaccgttgaaaagagccatcgtgggatacagcaagcggccagccctgttgccatg
accgtgagcgtggctaagagtgccccgcagccctcacgaagacccaggcgggtgctgacc
gagagtagccagaacttggggaacgagaccggcacaacgtggctggacagcgatcgggac
gccagtcacctgagcgtgaccatcacgcagtctaaaaacagggcgcaggtttccaggcga
ccaaggcaggtgcgggcagagggtaaccggacggctgggaaagagaacagctcgctgtac
ctggacagcgatcgggaaacaagtaacgtatcggcgggcggcaggcggccaaaaggcgtg
gcacagcagcccaggaaagcgaggcaggcgccgggcgggaaggctgctgcttcggagcag
cagaaggaagccagcaacctgtttgaggcagtgaaactggccaagagcgccatgcagacg
ctggttgatgagtggctggaagtttacaagttggacagagaggccggtctgctggaacta
tttaacttcatcatccactgctgtggatgtaaaggtgtggttacttcgcagatgttccga
aagctgcagaacgcggagataatccggaagatgactgaggaatttgacgaggatagtggc
gattaccctctgtcgatggccagccccatgtggaggaagttccggcagaatttctgtgaa
ttcattgctgtgctgatacgccagtgtcaatacaccgtcctgtatgatgaatatatggtg
gatacactgatctctctgctgaccggactctctgattcgcaggtccgagcattcagacac
accagcacgctggccgcgatgaagctgatgaccgctctggtggatgtggccttgaatctg
aacgtccatcaggaaaacctccagcgccagtacgacaccgagaggaacaaagctgcgggg
aaacgggccaatgaccgcctggaaatgctgctgcagaaacgcaaggagctgcaacagaat
caggaagagattgaaaatatgatgaatgcaatcttcaagggagtattcgtccaccggtat
cgggatttgatagcggagatccgggctctctgtatggaggagatcggcgtgtggatgaag
cgttacagcgactcctttctcaacgacagctatctgaagtacgtcggctggatgttgcat
gacaagcaacgggaggtgaggctgaaatgtttgaagtctctccagcgcctgtacgaaagc
agagatatctctccgaaactggaactcttcaccaaccgattcaaggacagaatggtctct
atggtcctggatgtggattatgatgttgccgtggaagcagtccgtctattgactctcatt
tttcagaatgctgatgatgtgctgagcaacgaagagtgcgaatgtgtctaccccctggtt
tatgcctctcaccgacccactgcagcggctgccgggaactttgtgcacatgaagctgcgg
agacattacgatgtagaacacgaggagacgatggctaaagagcgaggaaagcgcagtgtg
aatggagaattcattaagttgctgctcacctttttcttggagagtgagctccatgagcac
tgtgcctacctggtggacagtctgtgggaccacgccggcccagtcctgaaggattgggaa
gggatgacggagttgcttctggaagagattggcgaagatgaggaggggctcactgatcaa
gaggagagtgctctgattgaactgatggtgtgttcgatgcggcaggcggtggagggtcac
ccaccgattggcaggacttccggcaagaagctgctgactgcgaaagagaggaagcagcaa
atggacgaccgagtcagactgtcggagcatctaatcgtcgtcatcccgcagctccttgcc
aagtattctgccgatgctgagaaagtggcaaatctcctgctgattcccagtttcttcgac
ctggacatttactgcagccggcgtctggagaagtatctggacctcctgctgaagcagatc
cgggacattgtcgagaagcacacagagaaggacgtgctggaggcctgtagccgggcgtac
tacaccctgtgcaatgaggactacaccatccggaaccgcgtggacatcgctcgcagccag
atcgtcgacacgctggtcgagatattcacccagtccgtggaggagctgctacatgaggtg
ggagagacggacgaggataatttgtacacggtggccacgtccctgaagagaatcactgcc
ctctacaatgcccacgaccttacccgatgggatttgttcgacagctgctgccgtgtcctg
gagcgagggattgacacaggagagatcccggaacagattatcattcaagcattgctctgt
gctcacttccatattctctggagactggccgtcatctccgagtatccagcgaccaaggaa
cagctcatcagactgaggaagcaacggaaaacggtcttcgcggtgtgtcagcacagcctg
tcgaacgcaagcaccagagtgagggaacagtccttcgtcctgctgtgcgacctgctggtg
attttcagcgctcagttgacaaaggatggccgcgaggagttgcagcccctggtcttcacc
gctgaccttccgctggtgtctgagctgttgagctttgtcatggaccatgtgttcgtcgaa
ccagaggaagacggagatgatgagtcgctgaagattgagatgttgcacaagaggaggaat
ttcctggctggattctgtaaactcataatctacaacatggtggatctgaggtctgccgcc
gacatcttcaagaactatatgaagtattacggtgactatggcgatattatcaaggagatg
ttggcgaaagcgcggctcattgacaaaatcgaatgtgccaagactctcctcctcagcttg
cagcagttgttcaatgagctgctccaggatcatggctccgccgtcaatcgctcctctcat
aatttctgcaccattaaggatctgggcaagcggtttgccctgacgttcgggctggacctg
atcaagagcagacagcccgtcgtctcgctgcatttggacgggataaagtttgccttccag
gagtatcaacccagcgcagtggcatcagcaccaatcaacctgccattcctcgatgtcctc
agcgaattctccaccaaactgttgcgacaggacaagaaggcagtcctcacctacctggac
aagacgttcccagcgcccctcactgcgatcattgaagcttggatgccgcttgcttcatac
cgccgctcactgctgacccgtggggaagacgacaccatgtccatgatcagcggcagagca
accagtgtgcggagcaagagagcgccagcgacctctgccaagaggaggaaactggaagtt
tcagccgtgagctcggacggatcgtggccgcagagtgcgggcagcttgcagatccacggc
aaactgcggaccccgatgctaacctcgaccatcctgagaccaccccagtgggacacgggc
agcctgcagagctccgacgaccaggattcggagaagggttccgactcggagtttacaaac
agtcaatcctggctagcttcgcaacagaataagcgacagagtcagaggattcagaagaac
caacagcagaagaatcaactgcgaaagagagtcaagaaacaacagctcctcagtctgatg
gaggaagatggagaggagtctgagggaggagaaatgatatcagacgccacgagcgaacgt
tcggatacaaacagcgaaatcagtctgcccgcacccctcagtcggcgaggcagagctgga
atgttacaggacctattcgactccagtatcctcgacattgatgatttttga
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