Scyliorhinus canicula (smaller spotted catshark): 119958607
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Entry
119958607 CDS
T11175
Name
(RefSeq) fibronectin-like isoform X1
KO
K05717
fibronectin 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04510
Focal adhesion
scau04512
ECM-receptor interaction
scau04810
Regulation of actin cytoskeleton
scau04820
Cytoskeleton in muscle cells
scau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119958607
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119958607
09142 Cell motility
04820 Cytoskeleton in muscle cells
119958607
04810 Regulation of actin cytoskeleton
119958607
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119958607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119958607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119958607
00536 Glycosaminoglycan binding proteins [BR:
scau00536
]
119958607
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119958607
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
119958607
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
119958607
Glycosaminoglycan binding proteins [BR:
scau00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119958607
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
119958607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119958607
NCBI-ProteinID:
XP_038643018
LinkDB
All DBs
Position
2:complement(139046072..139182423)
Genome browser
AA seq
2405 aa
AA seq
DB search
MPAGPWKMCHSTLRVFLLAVSLSAVSGQNTFDGNQNYCSDNGKVYHVNQQWERTYLGRVM
ICTCYGAGRGWSCESKPDVEEMCYDQYTGNQQRVGETWERPKDGMIWDCTCIGAGRGRIS
CTIANRCHEGGQSYKIGDTWRRPHETTGHMLECVCLGNGKGEWTCKPIAERCYDNVKGTS
HVVGDTWERPYQGWMMMECTCLGEGSGRITCSSRNRCNDQDTQIAYRIGDTWNKVDSQGN
SLHCTCKGKGRGEWECEHYGSLHLSSDVDLNVQPKVQPVAHKTQQCVSDGGSFYSDGMQW
FKKQGRTRMLCTCMHNGVSCRELPTQTYGGNSNGQPCVFPFTFTGKTYESCTSDGRNDGT
FWCSTTKHFDTDRSYSFCNQHAFTHIPSRGGNSNGALCHFPFLYNMVNYTECTSDGRRDS
MKWCGTTANYDADGMFGFCPMAETDEVCTNSEGVMFHIGDQWDKRHERGHMMRCTCNGNG
RGEWTCIAHSQLRDQCVVNGVTYEVLQSFKKRHAEGHEMNCTCFGQGRGRWKCDAIDQCQ
DTDTLQFYQIGDMFPKQINGIQYMCQCFGRGVGEWSCLPQQAVPGIGPVHVLFTEAMNLT
NTHPIKWNKHESIHISQYVLKWRPKHSMEQWREVTVPGNMFSYTLRDLRPGITYEGQLIS
KLPNNRRVVSKFEFTTSSVPFSPAEGESEPLASEDRITESSVTESIKEVTSSSFVVSWVS
ASDTVSGYRIKYELSEDNAQPQYLDVPKTATSVSIPNLLPGRKYIVNVFEVTDQGEKLIL
TKTPTTAPDSPTKHTVEQVGDSSMTIKWSMPQAPITGYRVVYTPSMEGASSTEIILPSTT
TNLTLSDLFPGVQYNISIYAVEENHESVPLIIQQGTTGTPRPVVVESPTNMGFTDVTPTK
IIVTWIPSITEITGYRINILPLSIPNKQIIEVPGFSSNFIEISNLNPGTTYRFDVYAMND
DIESAPLIGQHTTQLDTPTNLAFKDITDTSAVLVWSPPRGKVTSYLLTWGSTLEVQPNRI
NLGPDAPRHKLHQLTPGTVYVVTLTAKQDELTSPMVHQVLTTPETMVPIPKFKTEVTETA
IILTWTPLPKTSFRVGVRSSQGGEKPREVTSDSGNITISSLTPGTEYTISITLLENDKPR
ESIVTKSIITELSPPANIDVHSNRGTGEPTISWEGGASPGITGYRVTAVPRKGEGGSMLE
EFIDAGHTSWTPEKLIPGVEYDVSIYTIKNGKESRPVTTEITQEIPQLTDLTFVDVSDTT
IDLRWTPLNYSAITGYRITVIAAGESVPIFEDFVSSSTGYYTVRGLEPGIDYDISVITLI
EGGDSIATTRKQQTAVPPPTRLRFNHVGEDSMRISWSPPTSVDLSGFLVSYSPVKDESGS
TDLTIAPTSSMVMLTGLLPGTEYIVKVYSVIVGSQSTPLVGRQRTGIDTPTGIDFSDTKA
TSFTVHWQPTRSPITGYRVRHYLNNGANPREERVPSTRTSLQLTNLVPASEYVISISAFN
GRRESLPLVGQHSTFSDSPTDLEFTQSTPTSLSIKWRAPPLNVKYYRVAFGESGGRGPVK
EITVPGGESTITIPNLKPGTEYTVTLYAVTGRGDSPAISKPLVATEKTEIDTPTLLKVQP
VNDKSITVSWKPPTAKVTSYKISSTPKSGKGPVITRVVSGDATEVTLEGLDPNTKYTISV
KAQGEHGESMKLTEIADTSIDRPKGLTFTDVEVDSIRLAWERPEGQVTAYRVTYSSPKDG
LRELVPSPHFRDDSAELVGLRPGTEYTVQVYAMYDSQESTPLIGKQSTAIASPTDLEFVQ
VTPTSMTISWHAPNAPVTGYRVLVKPREKNGPSKELNLTPENTSATVSGLMVATKYNILV
YAIKNELTSQPLQGIKTTLDNVSSPRRIRISGVTETSITLQWRTKSEIITGFQIDAVPSS
GSGTVQRTVGPDQRTFTLTGLLPGTEYNINIYTLSGDSRSPPSTATARTAIDSPSNLRFI
STTPSSILFTWQQPAAEITGYFITYNAMGERPLELDPQPTDKAKEAMITGLRPGTEYTIL
IRAVHDSLKSEPLSGKETTGQEDGKRPSIDSGKKPGDSKELSPTDQLTYQPGEKTEGPHG
KTQTPTFHSQGTESFEGDLPNGPGNQPELTEITSSGEVRQPKTIVSWTPTIVALEYLVTC
NPVGNTDQTFQLRVPGTSTYAVLPNLVSGAKYNILVEALDGTGKRKVLQDVITVGNSSPE
TSTIISDGSCFDTTTNTHYTIGQEWERMSESGYKLWCRCAGYGSGHFKCESSKWCHDNGM
NYIIGEKWDRHSETGQMLSCTCKGNGKGEFNCEPHEDTCYDEGSVYNIGEQWQKEYLGAI
CTCNCLGGQQGWRCSNCHKPGVDTLPGGTGPLLPDNSGHSPKYTKVKHGSKYINCPIECL
APDRE
NT seq
7218 nt
NT seq
+upstream
nt +downstream
nt
atgccagctggtccctggaagatgtgccactccactctccgggtcttcctcctggccgtg
tctctgagtgcagtcagtggccagaacaccttcgatgggaatcaaaattattgctcagac
aatgggaaggtttaccatgttaaccagcaatgggaacgtacttatctgggccgtgtcatg
atctgtacctgttacggagcaggtcgaggctggagttgtgaatcgaaacctgacgttgaa
gaaatgtgctatgaccagtacactggcaaccagcaacgtgtcggcgaaacttgggaacgc
ccgaaggatggtatgatttgggactgcacctgtatcggagctggcaggggaaggatcagc
tgtaccattgcaaatcgctgccatgaaggtggtcagtcctataagattggtgatacctgg
cggagacctcatgagacaactggccatatgttggagtgtgtttgccttggtaatgggaaa
ggagaatggacctgcaagccaatagcggaaagatgctacgacaatgtcaaaggaacaagc
catgttgttggagacacctgggaacggccataccaaggctggatgatgatggagtgtact
tgtctgggagagggcagtggacgtatcacctgcagttcacgcaaccggtgcaatgaccag
gatacccagatagcctatagaattggagacacctggaacaaggtggacagccaaggaaat
tcacttcactgtacctgtaaaggcaaagggcgtggagagtgggagtgtgaacattatgga
tctttgcatctgagttctgatgttgaccttaacgtacagcctaaagtccagcctgtcgct
cacaaaacccaacaatgtgtcagtgatggtggttccttctacagtgatggaatgcagtgg
ttcaagaagcaagggcgcacgcgtatgttatgtacctgcatgcataatggcgtgagctgc
cgtgaattgccaacgcagacatatggagggaattccaatggacagccttgtgtgtttcca
ttcacgtttacgggcaagacttatgaatcctgcacgagcgatggacgaaacgacggcaca
ttttggtgcagtacgaccaaacactttgacacggatcgctcttactctttctgcaaccag
catgctttcactcacatcccgagccgaggggggaactccaatggtgcattgtgtcacttt
ccattcctgtacaacatggtaaactataccgagtgcacatccgatggaagacgggacagc
atgaagtggtgtggaacaactgctaactatgatgctgatgggatgtttggcttctgtcca
atggcagaaactgacgaggtttgcaccaattcggaaggggttatgtttcacattggtgac
caatgggacaagcgtcacgagcgtggtcacatgatgaggtgcacgtgtaatgggaatggc
cgcggcgaatggacttgcattgcccactctcaactgcgagatcagtgcgtggtgaatggg
gtaacatatgaagtgctccaaagctttaaaaaacgacatgccgagggtcacgagatgaac
tgcacctgcttcgggcaaggccgaggtcgatggaagtgcgatgccattgaccagtgccag
gacaccgacacgctgcaattttaccagattggtgacatgttcccaaagcagattaacgga
atccagtacatgtgtcaatgcttcgggcggggagttggagaatggtcgtgtcttccccag
caagcagttccaggaattggacctgtgcacgtgctgttcacagaggcaatgaatctaacg
aacactcatcctattaagtggaataagcacgagtccatccacatctcgcagtatgtcctg
aaatggaggcctaaacactcgatggagcaatggagggaggtgactgttccaggcaacatg
ttttcctacacgcttagagacctgagaccaggcatcacctatgaaggccagctcatcagc
aagttgccgaataaccggagagtcgtcagcaaatttgaattcacaacctcctccgtgcct
ttctcccccgctgagggcgaatcagaaccgttggctagcgaagaccgaattactgagtcc
tcggtgacagaatcgatcaaggaggtcacatccagcagcttcgtggtgtcctgggtttca
gcctccgacacggtgtctggatacaggatcaagtacgagcttagtgaagataatgctcag
cctcagtacctggatgttccaaaaacagccacatctgtttccattcctaacttgctgccc
ggccgcaagtacattgtgaatgttttcgaagtcacagatcaaggagagaaactgattcta
acaaagacgcccaccacagcgcctgacagccccaccaaacacaccgtggagcaggttggc
gattcctccatgaccattaaatggagcatgcctcaggctccgatcacaggttaccgtgtg
gtgtacacaccatctatggaaggcgccagcagcacggagatcattctgcccagtaccacg
accaacctgaccctgagcgaccttttccctggtgtccagtacaacatcagcatctatgcc
gtggaggagaaccatgagagtgtccccctgatcatccagcagggtaccactggcaccccg
cggccagttgtggtggagtctcccacgaacatgggcttcaccgatgtcacccccactaag
attatcgtcacatggatcccgtctattaccgagatcactggctatcgcatcaacatcctc
ccgctcagcattcctaacaagcaaatcatcgaggtgcctggcttcagctccaacttcatc
gagatcagcaacctgaaccctgggaccacctaccgcttcgatgtgtacgctatgaacgac
gatattgagagcgcccctctgattgggcaacataccacccagttggatactccaaccaac
ctcgcgttcaaagacatcacggatacctcggcagtattggtctggtcaccgcctcgaggc
aaagttacctcctacctcctgacctggggctcgacgcttgaagtgcaacccaatcgcatc
aaccttgggccagatgctccccgccataagctgcaccaactgacacctgggactgtgtat
gttgtcactctcactgctaaacaagacgaattaacaagcccgatggtccaccaagttcta
acaacgcctgagactatggtcccaataccgaagtttaagacagaggtgaccgagacggct
atcatactcacctggacccccctgcccaagacatcattcagggtcggagtccgatccagc
caaggcggagaaaagcctcgagaagtaaccagtgactctggaaacatcacgatctccagc
ctgactcccggcacagagtacaccatttccattacactgctggagaacgacaagccacga
gagtctattgtcacgaagagtatcatcactgaactctccccacccgccaacatagacgtc
cattccaaccgcggcaccggggaaccaaccatatcttgggaagggggagcatcaccaggt
atcactggctaccgggtgaccgctgtcccgagaaaaggcgagggcggcagcatgttggag
gaatttattgacgccggacacacctcctggactccggagaagctgatccctggtgttgaa
tacgacgtcagtatttacaccatcaagaacggcaaggaaagtcgtccagtaaccacggag
ataacccaagaaattccccaactcactgacctcaccttcgttgacgtaagcgacacgacc
atcgacctgagatggacgccgcttaactattcggccattactggctaccgcatcacagtt
atagcggcgggggagtccgttcccattttcgaagactttgtcagctcatcgactggatac
tatactgtgcgaggcctggagcctgggatagattacgacatcagtgttatcaccctgata
gagggtggtgacagtatcgccaccacccgaaagcagcaaactgcggtcccgccccccacc
aggctgcgcttcaaccatgtcggagaggactccatgaggatcagctggtccccacccacc
tccgtcgatctcagcggtttccttgtgagctacagtccagtgaaggatgagagtgggagc
actgacctgaccatcgcgccgaccagcagcatggtcatgctgacaggtctcctgcctggt
actgaatacatagtgaaggtgtactcggtgatcgtcgggagtcagagcactccgctagtt
ggaaggcaacgaacaggcatcgacacaccgactggcattgacttctctgacacaaaggcg
acctctttcaccgtgcactggcagcccacaagatctccaatcactggatacagggtgcgg
cattacctcaataatggggccaatcctcgggaagagcgggtaccatccacacgcacctcc
ctccagctgaccaacttggtgcccgcctcggagtatgtcatcagcatctctgcattcaac
ggcaggcgggagagcttgcccctggtgggccagcattccacattctctgattccccgact
gacctggaattcacccagtccacacctacgagtctgagcatcaagtggagggcaccgccc
ctgaatgtcaaatattaccgcgtcgcattcggagagtcaggaggccgtggcccggtgaag
gagataactgtgccgggcggcgagtccaccatcaccatacctaacctgaagcctggcacc
gaatacaccgtaactttgtatgccgtcactggccggggagacagcccagcaatcagcaag
cctctcgtggctacagagaagacagagattgacacaccgactttgctgaaggtgcagcca
gtgaatgacaagagcataaccgtcagctggaaacctcccaccgccaaagtgaccagttac
aagatcagcagcaccccaaagagcggcaaaggcccggttataacccgcgttgtctctgga
gatgcaactgaagtgactctcgaaggcctggacccaaacaccaagtacacgatcagtgtg
aaagcccaaggagagcatggagagagcatgaagctcaccgaaatagcagatacctccatc
gaccgtccaaaggggctgacgttcacggacgtcgaggtggattctatccggctggcttgg
gagaggcccgagggacaggtcacagcatacagagtgacctattccagccccaaggatggg
ctccgtgagctcgtgcccagcccacacttcagggacgattctgccgagctggttggcttg
cggccaggaacagagtacacagtgcaggtctacgccatgtatgattcccaggagagcacc
cctttgataggcaagcagagcacagccattgcatctccgactgacctggagttcgttcaa
gtgactccaacgagcatgactattagctggcatgcacctaatgccccggtgacaggctac
cgtgtgttggtgaaaccaagggagaagaatggcccgagcaaggagctgaatctgaccccc
gagaacacgagtgccacagtctccggtctcatggtcgcaactaaatacaacatcttggta
tacgccatcaagaacgaattaaccagtcagcccctgcagggcatcaaaacaacattggac
aatgtcagctcgcccaggagaatccgcatcagtggggtgacggagaccagcatcacgctg
cagtggcgcaccaagtccgagatcatcactggattccaaattgacgctgttccttccagc
ggcagcgggacggtccagaggacagtggggcctgatcagcgaacgtttaccctcacaggc
cttctgccgggcaccgagtacaacatcaacatctataccctgagcggcgattctcgcagt
ccaccctccacagccacagctcgaaccgcaatcgattctccatcaaatcttcgattcatc
tctacgacccccagcagcatcttattcacgtggcaacagcctgccgccgagatcaccggc
tacttcatcacctacaacgccatgggggagcgcccactggagctcgacccacagccaaca
gacaaagccaaagaagcaatgatcacaggattgcggcctggaactgaatataccatcctc
ataagagctgttcatgactctctaaagagtgagccactgagtgggaaggaaaccacaggg
caggaagacggcaagaggccatccatcgattctggcaaaaagccaggggactccaaagag
ctgtcccccaccgaccagttgacctaccaacccggcgagaaaactgaaggacctcatggc
aaaacccaaaccccaaccttccactcacaaggaacggagtccttcgaaggagatcttccc
aacgggcccgggaaccagccagaactaaccgaaatcacctcctcgggggaggtgcgacag
cccaagaccatcgtctcctggacaccgaccatcgtagccttggagtacctggtcacatgt
aatcccgtaggcaacacggatcaaaccttccagcttcgggtaccaggaacctccacgtat
gccgtgctgcctaaccttgtgtcaggggcaaagtacaacattctcgtcgaggctctggat
gggacagggaagcggaaagttctgcaggacgtcatcactgtgggaaattcctctcctgaa
acctcaaccatcatctctgatgggtcctgctttgacaccacgacaaatacccactacacc
atcggccaggaatgggagcgaatgtccgaaagtggctataaactgtggtgtcgatgcgct
ggctatgggagtggtcatttcaagtgtgaatcatctaagtggtgccatgataatggcatg
aactacataattggcgagaaatgggatcggcacagtgagactggccaaatgctcagctgt
acctgtaaaggcaacggaaagggagagttcaattgtgaaccacatgaagatacctgttac
gatgaaggcagtgtgtacaacataggtgaacagtggcagaaggagtaccttggtgccatc
tgtacatgcaattgcttaggaggacaacagggttggcgctgcagcaactgtcacaaacct
ggggttgacaccctgccgggcgggactggtcctttattgcccgataattctggccattcg
cccaaatacacgaaggtgaaacatggatcaaaatacatcaactgcccaatagaatgcctg
gcccctgatcgcgagtaa
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integrated database retrieval system
