Scyliorhinus canicula (smaller spotted catshark): 119958609
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Entry
119958609 CDS
T11175
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119958609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119958609
Transcription factors [BR:
scau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119958609
SSDB
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Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS_9
PAS
Motif
Other DBs
NCBI-GeneID:
119958609
NCBI-ProteinID:
XP_038643016
LinkDB
All DBs
Position
30:<13102549..13118627
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AA seq
490 aa
AA seq
DB search
RKKGSNRRCECAWGHGDRSYCRVRCGNATEDLGSMNRLSFLRNRYRIGLGPVKEGEIQYV
VVHCTGYIKAWPPTGVTLPDDEPEGQGNKFCLVAIGRLQITSSPNCVDMKGNSVPMEFLS
RHSPNGVFTFVDHRCVGTIGYQPQELLGKDIVEFAHPEDKGLLRDSFQQVVTLKGQVLSV
MFRFHAKNREWVVIRTSSFTFQNPYSDDIEYIVCTNTSVKHLQQPPAISAQEELTYEHPQ
VAVQPPSSDHTKPINKGETLYSRETDTRYTEIYSAIPTAEQNKVMPSTPGTGSQQIYQQG
SSFPATRPAQNFSAAAMVPPVNIVEQPASAGQILAQISRQSASGQVTGNTWSGSRPPFPA
QQMTAQGVKTQTPSFGLGAGRTFSASAASFSPLASPVATSSAGGTAYPPLANRTSAFVEG
GQSSAQFQTRPADGASVWPQWQGQHHSQTASEQQSQPEVFPDMLSIYEDQGSSYNSDEFS
ELPIFPSFSE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
agaaagaagggcagcaatcgtcgatgcgaatgtgcatggggtcacggcgatcgttcatac
tgcagagtgaggtgtgggaatgcaaccgaagatctggggtccatgaatagactcagcttc
ctgaggaaccgatacaggattgggctgggtccagtcaaagaaggagagatccaatatgtt
gtggtgcactgtactggttacatcaaagcctggccgcccacgggtgtgacgcttcccgac
gatgagccagaggggcaaggaaacaagttttgcctggtagctatcggacgactgcagatc
actagctcgccgaactgtgtggacatgaaaggcaacagtgtgcccatggagtttctttcc
aggcacagcccaaatggggtcttcaccttcgtcgaccatcgctgcgtgggcaccatcggc
taccagcctcaggagctgctgggaaaagacattgtggagtttgctcaccctgaagacaag
ggacttctacgcgacagcttccagcaggtggtcacgctgaaggggcaggtgctgtcggtc
atgttccgattccacgcaaagaaccgggagtgggtagtgatcaggacgagcagcttcacc
ttccagaacccctattcggatgacatcgagtacatcgtctgcaccaacaccagtgtcaag
cacctgcagcagcctccagccatctccgcgcaagaagagctgacctacgagcacccgcag
gttgcggttcagcctccatcgtcagaccacacaaaacctatcaacaaaggagaaaccctg
tacagcagggagacggacacccgttacactgaaatctactctgccattcccacagctgag
cagaataaggtgatgccctccactccgggcaccggcagccagcagatctaccagcagggg
agctccttcccggccacccgtcctgcccagaacttcagcgccgccgccatggtcccgcct
gtgaacatcgttgagcagccagcgtcagcgggacagatcctggctcagatctcgcggcag
tcggccagcggccaggtcactggaaacacgtggagtggaagccgcccaccgttcccagcg
cagcagatgacagcccagggggtaaagacgcagacgccttcgttcggcctgggagccggc
cgcaccttctcagccagcgccgcctccttcagccccctcgccagccctgtagccacatcc
tcggccggaggcaccgcctacccgcccctcgccaaccgcacctccgctttcgttgaaggc
ggacagagcagcgcgcagttccagacccggcctgcagatggagcctccgtgtggccgcag
tggcagggtcagcatcactcgcagacggccagcgagcagcagagccagcccgaggtgttt
ccggacatgctgtccatctatgaggaccagggaagcagctacaacagtgacgagttttcg
gagctccccatattcccctcgttctcagagtaa
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