Scyliorhinus canicula (smaller spotted catshark): 119958675
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Entry
119958675 CDS
T11175
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119958675 (rnf115)
04121 Ubiquitin system [BR:
scau04121
]
119958675 (rnf115)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119958675 (rnf115)
Membrane trafficking [BR:
scau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119958675 (rnf115)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119958675 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-Nse
zf-RING_6
HypA
zf-met
Motif
Other DBs
NCBI-GeneID:
119958675
NCBI-ProteinID:
XP_038643177
LinkDB
All DBs
Position
30:complement(15078660..15114453)
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AA seq
299 aa
AA seq
DB search
MAEAAAVSPLRFFCHCCKGEVCPKLPEYTCPRCESGFIEEVTDETSFLDSGTNGLDDDSA
TQFAELWDHTFLNLDQTFLFVDGRPLRSGASLDNDSGETERGGQQNDIWGPSRHTRLPMA
RRYRSRGTSRPERSPAIEGIIQQLFAGLFNAGISGQPQTFSWSGMLHSNPADYAWGQSGL
DAVITQLLGQLENTGPLPADKDKITALPTVHVTQEQIDSGLECPVCKEDYVLGEQVRQLP
CNHFFHSDCIVPWLQLHDTCPVCRKSLNGEVTMGHRQTTAELSGDLTDSENRPRDPWTY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggccgtctctccgctccgcttcttctgtcactgctgcaagggggaa
gtctgccccaagctgccggaatatacctgccctcggtgtgagtccggctttatagaggag
gtcacagatgaaacgagtttcttggacagtggaaccaacggactggacgatgattcagcc
acacaatttgcggagctatgggaccacaccttcctgaacttggaccaaaccttcctcttt
gttgacgggaggcccttgagaagcggggcctccctggacaacgacagcggggagacggag
cgaggaggccaacagaacgacatctggggtcccagccggcacacgaggttaccgatggct
agaagatacagatctcgaggaacgtcgcgccctgagaggtcgccagccattgaaggtata
atccaacagctgtttgctggacttttcaatgctggaatctcaggtcagccgcagacattc
tcctggagcgggatgctgcactcgaaccctgccgattatgcctggggacagagtggactc
gacgccgtgattacacagcttctgggccaactcgaaaacaccggacccctcccggccgat
aaagacaaaatcacagccctcccgacagtgcacgtcacacaggagcagatcgactccggt
ttagaatgtccggtctgtaaagaggattatgtccttggggaacaggttcgacagctgccc
tgcaatcacttcttccacagcgactgcatcgtaccctggttacaactgcatgacacctgc
cccgtgtgccgcaagagtttgaacggagaggtcaccatgggccatcggcagactacagcg
gagttatctggtgacctgacggacagtgaaaaccggccgcgggacccctggacgtactga
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