Scyliorhinus canicula (smaller spotted catshark): 119958867
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Entry
119958867 CDS
T11175
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119958867 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119958867 (sf1)
Spliceosome [BR:
scau03041
]
Complex A
Other components
Complex A specific factors
119958867 (sf1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
zf-CCHC_5
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
119958867
NCBI-ProteinID:
XP_038643305
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Position
31:1446422..1465902
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AA seq
447 aa
AA seq
DB search
MEEPGRFYMMSSFGQAPRERDDFGQKRRKRSRWSNETSDQKTVIPGMPTVIPPGLTRDQE
RAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEER
HNLIQEMIALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEK
ECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRGILKQG
IETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTLCTKCGGAGHIA
SDCKFSSGASFNRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASSSSAHPGSTQQTMPR
TTGPASNQQQLPNRPPWMSSGPSDGSRPYHGMHGGPGAPHPGFPPPMPNMTGHPHPHNPN
GPPPPWMQPPPPPMNQGHPPVHPPMSK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccgggccgcttctacatgatgtcttcgttcggtcaggcgccgcgggagaga
gatgacttcggacagaagaggaggaagcggagtcgctggagcaatgagacttcggatcag
aagacggtgatccccggaatgccgactgtgatcccaccgggactgacacgggatcaggaa
cgtgcttatatcgtgcaactacagatcgaagacctgacccgcaaactgcgtactggagat
cttggtatccccccaaaccctgaggacaggtctccctctcctgagcccatctacaacagc
gagggcaagaggctgaacacccgtgagttcagaactcggaagaaactggaagaggagaga
cacaatctcattcaagagatgatagccctcaatcctgatttcaaaccaccggcagattac
aagccgccagccacgcgtgtgagtgacaaagtgatgatcccacaggacgaatatccagaa
ataaactttgtcggactcctgatcggacccagaggcaacacactgaagaacatcgagaaa
gagtgcaacgccaaaatcatgatccgcggcaaagggtcagtgaaggaggggaaggtgggc
cgcaaggacggacagatgcttcctggggaggatgagccactgcacgcgctggtcacggct
aacaccatggagaatgtgaaaaaggcagtagaacagatccgtggtatcctgaagcagggg
attgaaacccccgaggatcagaacgaccttcggaagatgcagctgagagagctggctcgc
ctgaacggcactctgcgagaggacgacaacaggatactgagaccgtggcagagcactgag
ccgcggagcatcaccaacacgacgctttgcaccaagtgcggcggggccgggcacattgct
tccgattgcaaattctccagtggggcctcgttcaacaggccgggagacccgcagtcggct
caagacaaagcgcgaatggacaaggagtacctgtcgctgatggccgagctgggagaagcc
ccagtccccgcctcgtcgtcctcggcccacccgggttccacgcagcagaccatgccgcgg
accaccggacctgccagcaaccagcagcagctcccaaacagacctccgtggatgagctcc
gggccctcggacggcagcagaccttaccacgggatgcacggcggccccggcgcgcctcac
ccaggcttccccccgccgatgcccaacatgactgggcacccacacccccacaaccccaac
gggccaccgccgccttggatgcagccaccgccgcctccgatgaaccagggtcacccgcct
gtgcatccgcctatgagtaagtga
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