Scyliorhinus canicula (smaller spotted catshark): 119958947
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Entry
119958947 CDS
T11175
Symbol
ints5
Name
(RefSeq) integrator complex subunit 5
KO
K13142
integrator complex subunit 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119958947 (ints5)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
119958947 (ints5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
DUF4388
GBP_repeat
Motif
Other DBs
NCBI-GeneID:
119958947
NCBI-ProteinID:
XP_038643399
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All DBs
Position
31:306707..312066
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AA seq
959 aa
AA seq
DB search
MAAAAALEGSANHRAGISSQELLQEMKAFISGIDPVRGHKLTVKDHARCGILLLRNLPPA
RGAVLEYLRGVFDEYVSCYILDLNHEGGMGSGRGPVLGRPGLDDVTQEIQTVLSEFVHSN
PRAWAPLVSAWSIDLMGQLSSKYSGRHQVPHASSLNELLQLWMSCKATRVLMDIYMQCLS
SMISSCPDACVDALLDTSVQHSPHFDWVVAHIGSSFPNTIISRVLSCGLKDFCMHGASSV
VDPLFPTLADKRVPKMASVVGILGHLATRHSASIKQELLLMFHESLGSGRDAQQLATVPF
LLQLAAMSPMLLSTVSGELIDSLKPPVLDQLHQHFTGLGRDDAENLVGLVVHLICQTGPG
AYRILQFLVNTAMPASVITTPGLAVRESVREACHRIIQLLLLNLQKLVYNRPSASLCEPQ
PRPIPFFDELKGRVRDLCVETLRLERKRHLWQHQLLGLLSVYCGQSCATEALCHLLAFAC
SPEELALPVQLYGGLAASMPGLLPATVRRCVARLHSSSLPEMQAARLMVNLATLVQWEGP
EEEMPSPIGARLADALSWHVRDLGQLLPHSDPQVSEAAALLLSAVPLPPALSPAQLAGLV
RSAVGQFLLALRRGRVAAASDCGRLLTRLSAVSAAALRAVLQQLVRSATHSGSAGLFGGW
VQGAAWAPGIPPASASGDALLDVNRKFGTAVNFSGSIWAVFHAGVIGRGLKPASTVTGPG
PQEAAHNLYQLLSLVVRCGSGGRPLAEPDPGLSHPPINPEAAKAVAVALVEGLCPDVTNS
ELAWPPEEHARNTVERDLQIRNRFEENPLLFPLLQFVALGRPALCYCSVLLRGLLATLMA
HWEASRHSLTASSPWQLQASCSLISCMGQGQLLPPVLSNMHEIFHLLTPFEVHLLLLTVW
EYMKDNGPLPQKFTFDPEQGQFYRDFARDGDISKYLNVLHSILHKNIGHLGHLCGRFQV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcggccctggagggaagcgccaatcaccgggccggaatcagttcgcag
gagttgctgcaggagatgaaggcttttatcagcgggattgaccctgtccgcgggcacaag
ctgacagtgaaagaccacgctcggtgcgggatcctcctgctgcggaatctgccaccggcc
cggggggctgtcctggagtacttgcgaggggtcttcgacgagtatgttagctgctacatc
ctggaccttaaccacgagggtgggatgggcagcgggcgagggcctgtcctggggcggccg
ggtctggacgatgtcacccaggagatccagactgtcctgtccgagtttgtccactctaat
ccccgggcctgggcccccctggtgtcggcctggtccatcgacctgatgggccagctcagc
agtaaatactccgggcggcaccaggtgcctcacgctagcagcctgaatgagctgctgcag
ctgtggatgtcctgcaaggctacccgggtcctgatggacatttacatgcagtgcctgtcc
tcgatgatcagcagctgccccgacgcctgcgttgacgctctgctcgacacctccgtccag
cattcgccccactttgactgggtggtggcccacatcggctcctccttccccaacaccatc
atcagccgcgtcctctcctgcggcctgaaggatttctgcatgcacggggcctcctccgtc
gtggacccgctcttccccaccttggccgacaagcgagtccccaagatggcctctgtggtg
ggcatcctgggtcacctggccacccggcactctgccagcatcaagcaggagctgctgctg
atgttccacgagagcctgggctcaggccgggacgcccagcagctggccaccgtgcccttc
ctcctgcagctggctgccatgtcgcccatgctgctcagcaccgtctccggggagctcatc
gattcgctcaagccccccgtcctggaccagctccaccagcacttcacgggcctgggccgc
gacgacgcggagaacctggtgggcctggtggtccacctgatctgccagaccggccccggg
gcgtaccgcatcctccagttcctggtcaacaccgccatgcccgcctcggtcatcaccacc
ccggggctggccgtgagggagagcgtgagggaggcttgccaccgaatcatccagctgctc
ctgctcaacctgcagaagctggtgtacaaccggccctcggccagcctgtgcgagccccag
ccccgccccatccccttcttcgacgagctgaagggcagagtgagggacctgtgcgtggag
actctgaggctggagcgtaagcgtcacctgtggcagcaccagctgctgggcctgctctcc
gtctactgtgggcagagctgtgccaccgaggctctgtgccacctgctggcgtttgcctgc
tcccccgaggagctggcgctgcctgtccagctgtacggggggctggctgcctccatgccc
gggctccttccggccaccgtcaggcgctgcgtggcccggctccactcgtccagcctcccc
gagatgcaggccgcccgcctgatggttaacctggccaccttggtgcagtgggaggggccg
gaggaggagatgccctcccccatcggcgcccgcctggccgacgccctctcctggcacgtc
cgcgacctgggccaactgctgccgcactccgacccccaggtctcggaggccgccgccctg
ctcctctcggccgtccccttgccgccggccctcagcccggcccagctggccggcctggtg
cgttcggcggtggggcagttcctgctggcgctgcggcgtggccgggtggcggcggcttcc
gactgcggccgcctgctgacccgcctgagtgccgtgtcggcggccgccctgcgcgccgtc
ctccagcagctggtccgctcggccacgcactccggcagcgccgggctgttcggcgggtgg
gtgcagggcgcggcgtgggcgccgggaatcccccccgcctccgccagcggcgacgccctg
ctcgacgtcaaccgcaagtttggcaccgccgtcaacttcagcggcagcatctgggccgtg
ttccacgccggtgtgatcggccgggggctgaagccggcctccaccgtcaccggcccgggg
ccccaggaggcggcccacaacctgtaccagctgctgagcctggtggtgaggtgcggcagc
ggcggccgccccctggcggagcctgaccccggcctcagccacccccccatcaaccccgaa
gcggccaaggcggtcgctgtggccctggtggagggtctgtgccccgacgtcaccaacagc
gagctggcctggccccccgaggaacacgcccgcaacacggtggagcgggacctgcagatc
cgtaaccgctttgaggagaacccgttgctcttcccgctgctccagttcgtggccctgggc
cggccggctctgtgttactgctccgtactcctccggggtctcctggccaccctcatggcc
cactgggaggcctcgcgccactcactgaccgccagctccccctggcagctccaggcctcc
tgcagcctgatctcctgcatggggcagggccagctcctgccgcctgtgctcagcaacatg
cacgaaatctttcacctgctcacccccttcgaggtccacctgctgctgctgaccgtctgg
gagtacatgaaggacaatggcccgctgccccagaagttcaccttcgaccccgagcagggc
cagttctaccgggacttcgcgcgggacggcgatatcagcaagtacctgaacgtcctccac
agcatcctgcacaagaacatcggtcacctgggacacctgtgtggccgtttccaggtctga
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