Scyliorhinus canicula (smaller spotted catshark): 119959007
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Entry
119959007 CDS
T11175
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04517
IgSF CAM signaling
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119959007
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119959007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119959007
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119959007
Intermediate filaments
Intermediate filament-binding proteins
119959007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
LPD22
LLC1
Motif
Other DBs
NCBI-GeneID:
119959007
NCBI-ProteinID:
XP_038643483
LinkDB
All DBs
Position
31:complement(2581745..2877220)
Genome browser
AA seq
2427 aa
AA seq
DB search
MSSTMSTATDYDSIEIQQQYNDINNRWDANEEEWDNENSSARLFERSRIKALADAGFNPQ
ETQPPLSPAAYVNSTQYSSVLEGRFKQLQDEREAVQKKTFTKWVNSHLARVTCRITDLYT
DLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVDKALQFLKEQKVHLENMGSHDIVD
GNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNVHNFTT
SWRDGLAFNAIVHKHRPDLIDFDKLKKSNAHYNLQNAFNVAEQQLGLTKLLDPEDVSVDQ
PDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDYAIEADNMIDKYETLASDLLQWIEH
TIITLNDRKLANSLNGVQNQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKV
YVPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLAHRFDRKAAMRETWLSE
NQRLVSQDNFGIDLAAVEAATRKHEAIETDINAYNERVQAVVAVAKELEAERYYDIKRIT
VRKDNVIRLWDYLRELLHARRERLMRNLELQKMFQEMLHIVDWMEDMKSRLQSQDYGKHL
HGVEDLLQTHTLVEADIAVQAERVKTVNMGAQKFITTEEGYKPCDPQIVQDRVTHLDLSY
QELCKLSAERRAKLEESRRLWKFFWEMGEEESWIREKEQIMSSEDYGKDLTSVMLLISKH
NSFKDEMSGRSGPLQQTIREGEGLIEEGHFGASEVAEKIEDIRGLWAHLEELAALREQRL
NEISNLYQFQADANDIDAWILDTLRLASSSDVGHDEYSTQTLAKKHKDMEEEIHNHRPTI
DALHEQARSLPADFAQSPEVDGRLPDIEQRYAELADLAQQRRQTLQDALALYKMFSEADA
CTLWIDEKEQWLNTMEIPEKLEDLEVVQHRFETLEPEMNSQASQIAAVNQVASQLLSSEH
RNKGEVTGMKDQLNSSWDQFRGLADQKKEALSSALSIQNYHLECNETKSWIKEKTKVIES
TQSLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLRKEAEKLASEHPEQAEAILARLSEI
NGVWEDMKDTMKKREESLGEASKLQGFLRDLDDFQSWLSRTQTAIASEDMAASLSDAEKL
LTQHENIKNEIDNYKRDYERMRNVGEEVTQDQTDAQYMFLHQRLQALDTGWNELSQMWEN
RHDLLAQVYGYQIFLRDVKQAEGFLNNQEYMLSHTEMPGTLETAEAAIKKHEDIETTMDA
NEEKINSVVDSGKKLMNEGNVYADKIKEKVDSIDERHRRNRKAAGDLASRLKDNLELQKF
LQDCQELTLWINEKMLTAQDMSYDEARNLHTKWQKHQAFMAELASNKDWLDKIDKDGKQL
ISEKPDTEPIVEEILNYLHRLWDDLESTTKAKAQCLFDANRTELFTQSCADLDTWLDNLD
AQLQSDDHGKDLTSVSILLKKQQMLENQMEVRQKEVEELKCQAQALGQEDTNIIEVDSKQ
KRVEERFQELLKPIEERRWNLMASKEGHQFNRDLEDEILWVNERMPLATSTDHGNNLPTV
QLLIKKNQTLQKEIQGHQPRIDDIADHGETMSKVGRVDSEALRARLGDLQDMWKELIEET
DKRNDRLQESHKAQQFYFDAAEAEAWMGEQELHMMSEERAKDEQSAMAMVKKHQVVEQSL
EDYAQTIHQLSNLSRNLVTNSHPESDRITLRQSQVDKLYAGLKDLAEERREKLQERLRLC
QLKREVDDLEQWIAEREIVAGSHELGQDYEHVTMLRDKFREFARDTSNIGQERVDSVNRM
ADEQIDLGHSENATIAEWKDGLNEAWADLLELIDTRTQMLAASYELHSFYHDARETLDRI
REKEKQLPEEVGRDLKTVERMHRMHTTYEHDIQALSTQVKQVQDDAARLRSAYAGEKAED
IQRHEDTVVEAWNALLNASKGRKQLLSDTVEKFRFFNLVRALMLWMDDVNRQMDTQEKPR
DVSSADLTIKNHQGIKSEIDARDDSFTASIEMGNALLTKNHYASDEIAEKLAQLQERRKE
INDKWKEKEDWLQLVMEVLQFGRDATVAEAWLATQEPYVRAADMGSNVDDAENLIKRHEE
FEKSAAAWEERFLSLEKLTTLEQQEIRRQQEEEERKRKPPPSPSPPTPRVSVTGEDGLEN
RTRAQQNELARDGEMVNHLEPIAQNGVHSDMESPQLLGDFRLLRDGAPSSVTVTVSEASE
PVNGTGDAPESGKDHSPVRKTPQSSPRPGSASTLLSKSQDATSVQLEGILCRKHEWESHS
KKASSRSWQNVYCVLRNRSLGFYKDSKNASTGIPYHGEVPVSLTEAKCEVAHDYRKRKFV
FKLRLSEGKEFLFQAKDEAEMISWIDGISTSILANQEDRYPANPQGLTRAMTMPPISPNS
GETVNLRRDKDGKEKDREKRFSFFKKK
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacaatgtcgacagccacagactacgacagcattgagatccaacagcagtat
aacgacataaacaaccgctgggatgccaacgaggaggagtgggacaacgagaacagctcc
gccagactctttgaacgctcacggatcaaggccttagcagatgcaggtttcaacccacaa
gaaacccaaccacccctgtcacctgcggcgtatgtcaattcaacgcaatactccagtgtg
ctggagggaaggttcaagcagttgcaagacgaacgtgaagccgtgcagaagaagacattc
accaaatgggtgaactcccacttagcgagggtaacctgccggatcacggacctctacacg
gacctgagggatgggcggatgttgatccggttgctggaagtgctgtcgggcgagcagctg
cccaaacccaccaaaggacgcatgcggattcactgcttggagaatgtggataaggccctg
caattcttgaaggagcagaaggtccacctggaaaacatgggctcccacgacattgtggat
gggaaccatcgcctcacactgggcctgatatggaccatcatccttcggtttcagatccaa
gatatcagtgttgaaacagaggataacaaggaaaagaaatctgccaaagacgcacttctg
ctgtggtgccaaatgaagacagcagggtatcctaacgttaatgttcacaacttcaccacg
agttggagggatggactggccttcaacgcaatcgtccacaaacacaggcctgatctgatt
gatttcgacaaactgaagaaatcgaatgctcactacaacttacagaatgcattcaatgtg
gcggagcagcagctgggactcaccaaactgctggatcctgaagacgtcagtgtggaccag
ccagacgagaaatcgatcatcacttacgttgctacatactatcactacttctccaagatg
aaggcactggctgtagaagggaaacgtattgggaaggtgctggactatgcaatcgaggcg
gacaacatgattgacaagtatgaaaccctggcctctgacctgctgcagtggatcgagcac
accatcatcacgctgaacgatcggaagttggcaaactcgctgaatggggttcagaatcag
cttcaggcgttcaacacataccgcaccgtggaaaaaccacccaagtttacagagaagggt
aatctggaggtgctgcttttcaccattcaaagcaaaatgagagcgaacaaccagaaagtc
tacgttccacgggagggaaagcttatctctgacattaacaaggcctgggagagactagag
aaagcggagcacgagcgggagctggccttgcgaaccgaactcattcgacaggagaaactc
gagcagcttgcccaccggttcgatcgcaaagcagccatgagggagacctggctgagtgag
aatcagcgccttgtttcccaggacaattttggaattgacctggccgcagtggaggctgcc
acgagaaagcacgaggccatcgagacagatatcaatgcctacaatgagcgcgtgcaggca
gtggtggctgtggccaaggagctggaggctgagcgctactacgacatcaagcgcatcacg
gtcaggaaggacaatgtcatcaggctgtgggattacctgcgggagctgctccacgcacgc
cgtgagcggctcatgaggaaccttgagctacagaagatgtttcaggaaatgctgcacatc
gtggactggatggaagatatgaagagtcgcctgcagtcacaggactacggcaaacacctg
cacggtgttgaggacctgcttcagactcacacgctggtggaggccgatatcgcagtccag
gcggaacgggttaaaacagtcaacatgggtgctcagaaattcatcaccactgaggaaggt
tataaaccgtgcgaccctcagatcgtccaagaccgcgtcacacacttggatctcagttat
caggagctgtgcaagctttcagcggaacgtcgcgcgaagctcgaggagtcccggcgcctt
tggaagttcttctgggagatgggcgaagaggagtcctggatccgggagaaggagcagatc
atgtcgtcggaagactacgggaaggatctgaccagcgtcatgctgctgatcagcaagcac
aattccttcaaggatgagatgagtggccgcagtggccccctgcagcagacaataagggag
ggagaaggcctcattgaagaggggcacttcggagccagtgaagtggcggagaaaattgag
gatattcgtggactgtgggcgcacctggaagagttggcagccctgcgggagcagaggctg
aacgagatctccaacctgtaccaattccaggccgacgccaacgacattgatgcttggata
ctggacaccctgcgcctcgcgagcagcagtgacgtggggcacgatgagtactccacgcag
acgctggccaaaaagcacaaggacatggaggaggaaatccacaatcacagaccgaccatc
gacgccttgcacgaacaagcccgaagcttgcccgccgactttgcccagtctccggaggtg
gatggcaggctgcctgacattgagcagaggtacgcggagctggccgacctggcccagcaa
cggaggcagaccctgcaggacgcattggcgctttacaagatgttcagtgaagcggacgcc
tgcacgctctggattgacgaaaaggagcagtggctgaacaccatggagatccccgagaaa
cttgaggacttggaggtagttcagcacaggtttgaaacactggagccagagatgaacagc
caagcctcccaaattgctgcagtcaaccaagttgccagtcagttactaagcagcgaacac
cgcaacaaaggtgaagtgaccgggatgaaagaccaactgaatagcagctgggatcagttc
cgaggccttgcagatcagaagaaggaagcgctgagctccgctctcagcattcagaattat
cacctcgagtgcaacgagaccaaatcgtggattaaagagaagaccaaagttatcgagtcc
acccagagtctggggaacgacctggccggggtcatggcgcttcagcgcaagttgactggc
atggaacgggacctggaggccatccagggaaaactggacgacctgcggaaagaggcagag
aagctggcctcggaacacccggagcaggccgaagccatcctggccaggctttcggaaatc
aacggcgtctgggaggacatgaaggacaccatgaagaaacgggaggagtcgctgggggag
gccagcaagctgcaggggttcctgagagacctggacgacttccagtcgtggctgtcgcgc
acgcagaccgccatcgcttcggaggacatggccgcgtcgctgagcgacgcagagaagctc
ctcacccagcatgagaatatcaagaacgagatcgataactacaagcgcgactatgagagg
atgcgcaacgtgggggaggaggtgacccaagaccagacggacgcccagtacatgttcctg
caccagaggcttcaggctctcgatacaggttggaatgagctgagccagatgtgggagaac
aggcatgacctcctggcccaggtgtatgggtatcagatcttcctgcgtgatgtcaaacaa
gcggaggggttccttaataatcaggagtacatgctttcacacacagagatgcctggcacc
ctggagacggctgaggctgccatcaagaaacacgaggacattgagaccaccatggacgcc
aacgaggagaagatcaacagcgtggtggattcgggcaaaaaactcatgaatgaggggaat
gtttacgctgacaaaatcaaggagaaagtggactccattgacgaacggcacagaaggaac
cgcaaagctgccggtgatctggccagccggctcaaggataatctggagttgcagaaattc
cttcaagattgccaggagctcaccctctggatcaacgagaagatgttgacggcccaagac
atgtcatacgacgaggctcgtaatcttcacaccaagtggcagaagcatcaggccttcatg
gcggaacttgcctccaataaagactggctggacaagatagacaaggatgggaagcagctg
atatccgagaagcccgatactgagcccatcgtggaggagatactcaattacctgcaccga
ctctgggacgacctggaatccaccaccaaggccaaagcccagtgtcttttcgatgccaac
cgcacggagctgttcacgcagagctgtgcggatctggacacctggctcgataacctggac
gcacagctgcaatcagacgatcacggcaaggatctgaccagtgtcagcatccttctgaaa
aagcagcagatgctggaaaaccagatggaggtccgtcagaaggaggtggaggagttgaag
tgccaggcgcaggcactgggacaggaggataccaacattatagaggtggattccaaacag
aagagggtggaggaacggttccaggagctgctgaaacccatcgaagagaggcgctggaat
ctcatggcatccaaagaggggcatcaattcaacagggatctggaggatgagatcctgtgg
gtaaatgaacggatgccactggcaacgtcaactgaccacggcaacaatctgccgactgta
cagctgctcattaagaagaaccagaccctacagaaggagatccagggtcaccagcctagg
attgacgatattgcggaccacggggagaccatgtccaaagtagggcgggtagattccgag
gcgctgcgagcccgcctgggcgacctacaggacatgtggaaggagctgatcgaggagaca
gacaaacgcaacgatcgcctgcaggagtctcacaaggcccagcaattctacttcgacgct
gctgaagctgaggcttggatgggggaacaggaactccatatgatgtcagaagagagggct
aaggatgaacagagtgcaatggcgatggtaaagaaacaccaggtggtggagcagtcgctg
gaggattacgcacagacaatccaccaactctccaacctgagcaggaaccttgtgacaaac
agccatcctgagagtgaccggattactctacggcagtcacaggtggataagctgtacgct
ggactgaaggacctggcggaggagaggcgggaaaagctccaggagcggctccggctatgt
cagctgaaacgggaggtggatgacctggagcagtggatcgcagagcgggagattgtggct
ggctcccacgagctgggtcaggattatgagcatgtcactatgctgcgggacaagttccgt
gagtttgcccgggacaccagcaacatcgggcaggagcgggtggactctgtcaaccgcatg
gccgatgagcagatcgacctgggccactcggagaacgccaccatcgccgagtggaaggac
gggctgaacgaggcctgggccgacctgctggagctcatcgacacccggacacagatgctg
gccgcctcgtacgagctgcacagcttctaccacgatgccagggagacgctggaccgcatt
cgggagaaggagaagcagctcccagaggaagtgggtcgggatctgaagactgtggagaga
atgcatcggatgcacactacatacgaacatgacatccaggctctgagcacgcaggtgaag
caggtccaggacgacgctgcccggctccggtctgcttacgctggcgagaaggctgaggac
atccagcgccacgaggacacggtggtggaggcctggaacgccctcctcaacgccagcaaa
gggcgcaagcagctcctgtcggacacggtggaaaagttccgcttcttcaacctggtgcgg
gccctcatgctgtggatggacgacgtcaacagacagatggatacccaggagaagccgagg
gatgtttcttcagcggatctgaccatcaagaaccatcaggggatcaagtctgaaatcgac
gcccgggatgacagctttactgcaagcatcgagatgggcaacgccctcctgaccaagaac
cactatgcttcagacgagattgcagagaagctggcccagctccaggaaaggaggaaagaa
atcaatgataaatggaaagaaaaggaagattggttgcagttggtaatggaggttctccag
tttggcagggacgcaacggtagcagaggcatggctggcaactcaggagccctacgtcaga
gccgccgacatggggagcaacgtggacgacgccgagaacctgatcaagcgccacgaagag
tttgagaagtcggccgctgcctgggaagagcgtttcctttccctggagaagctgacaaca
ctggagcaacaagagattcgccggcagcaggaggaggaggagaggaagaggaagcctccg
ccatcgccctcgccccccacgccgcgcgtctctgtcacaggggaagacggtctggagaac
aggactcgcgcacagcagaacgaattggcacgggacggcgagatggtgaatcacttggag
cccatcgctcagaacggagtgcactcagacatggagtcgccacagctgctgggcgatttc
agactattgagagatggcgcaccgtcatctgtgactgtgaccgtcagtgaagcatcagaa
cctgttaacgggacgggtgatgcaccggaatcagggaaggaccacagtcctgtcaggaag
acgccgcaatcgtctccacgccccgggtccgccagcaccttgctcagcaagtcccaggac
gcaacctcggtccagctggaaggaattctgtgtcggaaacacgaatgggagtcacacagc
aaaaaagcctccagcaggtcgtggcagaacgtgtactgcgtgctgaggaacaggagcctc
ggtttctataaagactctaagaatgccagcacaggcatcccataccacggagaggtgccg
gtcagcctgacggaagccaagtgcgaggtggcacacgattataggaagagaaagtttgtc
ttcaaactcagactcagtgaagggaaggagtttctgttccaggccaaggatgaggctgaa
atgattagctggattgatgggatctccacgtccatcttggccaaccaggaagaccgctac
cctgccaacccccagggcctgacgcgcgccatgacgatgcccccaatctctcccaacagt
ggtgagaccgtcaacctgcggcgggacaaggatggaaaggagaaagaccgagagaaaagg
ttcagcttcttcaagaaaaaatag
DBGET
integrated database retrieval system
