Scyliorhinus canicula (smaller spotted catshark): 119959306
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Entry
119959306 CDS
T11175
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04145
Phagosome
scau04514
Cell adhesion molecule (CAM) interaction
scau04517
IgSF CAM signaling
scau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119959306
04517 IgSF CAM signaling
119959306
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119959306
09142 Cell motility
04810 Regulation of actin cytoskeleton
119959306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119959306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119959306
04515 Cell adhesion molecules [BR:
scau04515
]
119959306
04090 CD molecules [BR:
scau04090
]
119959306
Membrane trafficking [BR:
scau04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119959306
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119959306
Cell adhesion molecules [BR:
scau04515
]
Integrins
Integrin beta subunits
119959306
CD molecules [BR:
scau04090
]
Proteins
119959306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
PSI_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
119959306
NCBI-ProteinID:
XP_038643543
LinkDB
All DBs
Position
2:149492759..149613908
Genome browser
AA seq
775 aa
AA seq
DB search
MVKWFLFKLMFAFVLGTGLADPSCNPTHAEATCRECINLGPTCAWCKTLNFTKAGEPNSA
RCDSEDTLKKRGCIQADIINPPNNMELKVDKPLVNSGANVIQIKPQKVKLYLRRGRPQKI
QVRFKRAEGYPVDLYYLMDLSYSMKDDLVNVKNLGGQLLQALRRVTKSIKIGFGSFVDKT
VLPFVNTHPEKMKNPCPDKTEACQPPFDFRHVLKLTDDANLFTTEVGKQSISGNLDPPEA
GLDAMMQAAVCEKEIGWRNVTRLLVYTSDDGFHFAGDGKLGAILTPNDGRCHLNRMGIYE
DNTKYDYPSVAELASKLAENNIQPIFAVTRKIMPVYQELSKMIPKSAVGELKEDSSNVVQ
LITDAYNNLSSTVILAHKNLPTGVRISYTSHCSDGETHSDKEGTCSNVKINTEISFTITV
TADTCLTKTESFEIRPLGFTEKLEISLQMRCDCKCDDKPELSTHCNNKGRVKCGVCSCTE
DRIGKFCECDPGKHSTKDLDTACRKDNTSTICSNQGDCVCGACICHTNPNKKIYGKYCEC
DDQNCERNLGKLCAGHGKCDCGRCECNKGFGGTACECAEAIGQCVESGMNATCSGRGKCT
CNECKCHAGYQPPFCKECPGCRSPCPTYVHCIECLGFSSGLYEKNCTESCKNIRHTLVDE
LKDQNVCKEKDSKKCWMSFSMKELDGVSQYDVTIKKTTECPQPPNIIAIVAGGVVGVLLI
GLLILLIWKLVTELYDRREYKKFEKERAKSKWNDADNPLFQKATTTVMNPNFNED
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtggttcctcttcaagctgatgtttgcctttgtgctgggaacagggctggct
gatccttcctgtaatcccacacatgcagaagcaacctgccgggaatgcatcaatttaggt
ccgacatgcgcctggtgtaagacactgaatttcaccaaggctggagaaccaaattccgca
cgctgtgactctgaggacaccctgaaaaagagaggttgcatacaagcagacataatcaac
ccaccaaataacatggagttgaaagtggacaagccactcgtgaattcaggagctaatgtg
atacagataaaaccgcagaaagttaaactttatcttcgacgaggccgcccacagaagatt
caggtgaggtttaagcgtgcggagggttaccctgttgacctgtactacctcatggacctg
tcctactccatgaaagacgatctggtgaatgtgaagaacctgggagggcagcttcttcaa
gccctgaggcgtgtcacaaaatcgatcaaaattggatttggttcctttgttgacaagaca
gtgctgccgtttgtcaatacgcacccggagaagatgaaaaatccatgtcccgacaaaacc
gaggcctgtcagcctcctttcgattttcggcacgtcctcaagctgaccgacgacgctaac
ttgttcacgacagaagtcggcaagcaatccatttctgggaatctggatcctccagaggca
gggctggatgccatgatgcaggcagctgtgtgtgagaaggagatagggtggcgtaatgtc
acacgacttcttgtgtacacttccgacgatggatttcattttgctggggatgggaaactt
ggagcgatcctgaccccaaatgatggccgatgccatcttaatagaatgggcatttatgaa
gataacactaaatatgactatccctctgttgctgaattggcttcgaagttggctgaaaat
aatattcaacccatattcgcagtcacaagaaaaataatgccagtataccaggaactgagc
aaaatgattccaaagtctgcggtgggtgagttgaaggaggattccagtaatgtggttcag
ctgataacagatgcctataataatttatcttcaaccgtgattttagcacacaaaaacctg
ccaactggagttcggatctcttacacgtcacactgcagtgatggagaaacccacagtgat
aaggagggaacctgttcaaatgtgaagattaatacggagataagtttcacaatcacagtg
actgcagacacgtgcctcaccaaaacagagtcctttgagatcagacccttgggtttcacg
gagaagttggaaatttcactgcaaatgcggtgtgactgtaaatgtgatgacaagcctgaa
ttatccactcactgcaacaacaagggtagagtcaagtgtggtgtatgcagttgtaccgaa
gatcgaattggcaaattttgtgagtgtgaccctggtaaacactcgactaaagatctggac
acagcttgccggaaggacaacacatcgactatctgcagtaaccagggagactgtgtgtgc
ggtgcatgcatttgccatacgaaccccaataaaaaaatctatggcaagtactgtgagtgc
gatgaccagaactgtgagagaaacctgggtaaattgtgtgctggtcatggtaaatgtgat
tgtggacgatgtgaatgcaacaaaggctttggtggaactgcatgcgagtgtgcagaggct
attgggcaatgtgtggagtcaggcatgaatgccacctgcagtgggagaggaaaatgcacg
tgtaatgagtgtaaatgtcatgcaggataccaacctccgttttgcaaagaatgtccgggc
tgtcgatctccatgcccgacctatgtacattgtattgagtgtcttggattctcaagtggt
ctgtacgagaagaactgcactgaatcctgtaagaatatacggcacactttagtggacgaa
ctgaaggaccaaaatgtgtgtaaagagaaagactccaagaaatgctggatgagtttctca
atgaaggagttagatggggtttcacagtatgatgtgaccatcaagaagacaacagaatgt
cctcagcctccaaatatcattgcaattgttgctggaggagttgtcggtgtgcttctaatt
ggactcctcattcttctgatctggaaactggtgactgaactctatgaccgaagggagtac
aagaaatttgaaaaggagagagcaaaatccaagtggaatgacgctgataacccactgttt
cagaaagcaaccaccactgttatgaaccccaatttcaatgaagactga
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