Scyliorhinus canicula (smaller spotted catshark): 119960242
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Entry
119960242 CDS
T11175
Symbol
als2b
Name
(RefSeq) LOW QUALITY PROTEIN: alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119960242 (als2b)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119960242 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
MORN
RCC1_2
VPS9
PH_alsin
Alsin_RLD
DH_ALS2
HA_Alsin
PH
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
119960242
NCBI-ProteinID:
XP_038643926
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All DBs
Position
2:complement(154295032..154486542)
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AA seq
1664 aa
AA seq
DB search
MAGQDTSPREEESPHERGILHVWKACGNTGIPEQLPGLGIKVVLHVALGTEHGVLLIEGG
DVCSFGHFPWRPDCEASHSAVPTLEQALTGLHVISVAAGSHHSGAVTQDGAVYMWGENSY
CQCAVQGQSHXPDPTLVTISDPETNPPELAKTVQLACGEQHTLALSSKREVWAWGSGCQL
GLVTTTFPVAKPQKLEHLAGRAVMQIACGAHHSLALVQKPWPHKKRQNSEKCHHCHQLLL
TMMDKEDHVIISDSHYCPLGMALSNSDHKHSALNANNYCSPEQLPHNHVTGTGSSELPQP
VQPEHSPDGVDKVELAQNPCNSEEGVPPSLQQEPSEAANNNQNPGAHPYPDEEAVKAYLR
KLSDNSQLDSSVKNKHPPSLPPSTTSEDTQPTSPSSVAPSTFNNLVVSCASVVGERVAAT
YEALSLRKVVNYYXTHPAQSAVAACIGSPASDGIQHKETREELVKMEECMPDKKSFSLGG
VSVEQGQKGWCRRLSLPALLPQVSPRLLRKAGRARIRSVSLTPTPGSEADAHLPSLQTEL
WSWGRGKEGQLGHGDVLPRLHPLCIKSLSSKEVVQVVAGAYHSLALTTSSQVYSWGSNTY
GQLGHTESPTVMPRLIKIPEGIRVWDVAAGQGHSLFLADGESFQPSIYYSGQQVLQEARN
TDRGHSCTQQPVLLSSCSKLGYVNSLFAGGQICLALSDRNVMGYIASLHELASSERRFHC
KLSAVKNQILKPLLGLDNLASILGSTLSQLLQDTASKFSKLCYLIGQHTVTLNKFLHGLK
DVKTLVMLEHSNIFLDTFKEYSSSVGNFLVVGGFQALAKPTVELFNRNMQTLQQLSEVTD
ESIHAADLLHTLFYMPIRHLHEYARVLLKLATCFEVVSKEYYKLQEVSCQCEALGLYLKK
KRKEAEYTYSFWKTFPGKMTDSLRKPERRLICESSNRGLTLQHAGRFSINWFILFNDALV
HAQFSTHHIFPLVTLWVEPHFEENSNLNALKITTAEEQFILTAASPQEKTKWLRAINQAV
DHSLSGAQEHVNPGLGSPMRAEPPISRTATYTFYKDPRLKEATYEGRWLSGKPHGKGVLQ
WPDGRMYTGDFRNGLEDGYGEYIIPNKTLKKNDHYQGHWKEGKMHGHGIYKYATGEVYEG
CFQDNMRHGHGLLRSGKLTSSCPSMFIGQWAQDKKMGYGVFDDITRGEKYMGMWLDDVRH
GNGVVVTQFGLYYEGAFSNNKMVGYGILLSEDDTSFEGEFSDDWILNGKGILTMQNGDYF
EGSFSGEWGTGIKVAGTYFKPNLYEDDREKSRVLRLGKLAVHPDEKWKAMFDECWSQLGC
ECAGQGDIKKAWDNIAVCLTTSRRQHKDSPDFRSRSHTQTLESLEVIPQIVGPLTLDKYE
TIRRYLMKACDTPLHPLGNLLETLVAVYRMTYVGVGANRRLLQQAVNEIKSYLIRIFQLV
RFLFPDLPDGDSLIPGTHTGKEDSNGGKDFADHWFPVITSCGLLLPVLLPRLYPPLFTLY
ALDNEREEDIYWECVLRLNKQPDLSLLSFLGVQPKFIPDTVSILGEKKEVQAITKEVCYA
SAIESLQQISTTFTPADKLNVIQQTFEEITQEVLTMLQEDFLWSMDDLFPVFLYVVLRAR
IRNLGSEVHLIEDLMDPSVQHGEQGIMFTTLKACYYQIQHEKLT
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggctggccaggatacaagcccgagagaggaggagagcccccacgagcgaggcattttg
catgtctggaaagcatgtggtaacactgggatccccgagcaactacctggtcttggtatc
aaagtggtgttgcatgttgccctgggaacagaacatggcgtgctcctgatagaaggtgga
gatgtctgcagctttgggcactttccgtggaggccggactgtgaggccagtcactcagca
gtccccactctggaacaagccttaactggcttgcatgtgattagtgtggcagccggaagc
caccacagcggagcagtaacgcaggatggagcggtgtacatgtggggagagaactcatac
tgccagtgcgcagtccaaggtcaaagccatnatcctgaccccactctggtcacaatttcc
gaccctgaaaccaacccccctgagctcgccaagacagtgcaactggcctgtggagaacag
cacacactggccttgtcgtcgaagcgagaggtttgggcctggggcagcggctgccagctc
ggactcgtcacaaccactttccctgtggcaaagcctcagaagctagagcatctcgctggc
cgggcagtgatgcaaattgcttgcggtgcccaccacagtctggccctggttcagaaaccc
tggccccacaagaagagacagaactctgaaaaatgccaccactgccaccagctgctgctg
accatgatggacaaagaagaccacgtgatcatctcagacagtcactactgcccgctgggc
atggcgctgtccaattccgatcacaagcactcagccctgaatgccaataactactgctct
cctgagcagcttcctcacaatcatgtcacaggcacgggaagctccgaacttccccaacca
gtgcagcctgagcactcgccggacggtgtcgataaagtggaactggcacaaaatccctgt
aactctgaggagggagtgcctcccagcctacagcaggagcccagtgaagcggcaaacaac
aaccaaaacccaggagctcacccctaccccgatgaggaggcagtgaaggcgtatctcaga
aagttgtcagacaactcccaactggactcctctgtgaaaaataagcatcctccgagcctg
ccaccatcaaccacatccgaggacacccagcccaccagcccttcctctgtagccccttcg
actttcaataacctggtggtctcctgtgcctcagtggttggggaaagagtagccgccact
tacgaagccctttcgctcagaaaagtggtgaattattacnntacccaccccgcccagagt
gcagttgcggcttgcattggcagcccagccagtgacggaatccagcacaaggagaccaga
gaggagttggtgaaaatggaggagtgcatgcccgacaaaaagagcttcagcctgggggga
gtatccgttgagcaaggccagaagggatggtgccggcgactgtctctgccagcattgctg
cctcaagtctccccgaggcttctcaggaaagctgggcgtgcaagaatcagatcggtgagc
ctgacccccacacctggcagcgaggccgatgcacaccttccttccttacagacagagtta
tggagctggggacgaggcaaagagggtcagctgggccacggagatgtccttcccaggctt
catcctctgtgcatcaagagtctgagcagcaaggaagtggtccaggtggtggctggtgcc
tatcactcgttggccttaaccaccagttcgcaggtctattcatggggcagtaacacttac
gggcaacttggccacacagagtcacccaccgtcatgcctcgcctcatcaagattccagag
ggcattcgtgtgtgggatgtggcagcaggacaaggacattccctatttttggccgatggg
gaatccttccagcccagcatctattacagtggacaacaggtgttgcaagaagccaggaac
actgatcgtggtcattcctgcacccagcaaccagtgcttctgtcaagttgtagtaagctt
ggctacgtgaacagcttgtttgcgggaggacagatctgtctggcactgtcagacaggaac
gtaatgggctacatagccagcttacatgaacttgcatcatccgagaggaggttccattgc
aagctgagcgcagtgaaaaatcagatactcaaaccactgctgggtttagataacctggct
tccattttgggttcgacattgagccagttgttacaagacacagccagtaaatttagcaaa
ctttgctatctgattgggcaacacaccgtcactttgaataagttccttcacggtttaaag
gatgtcaagacgctcgtcatgttggagcactcgaacatcttcctggacacgttcaaagag
tactctagctcagtgggcaattttttggtagttggtggttttcaagcattggccaagcca
acagtggagctcttcaacagaaacatgcagaccctccagcagttgtccgaagttactgat
gagagtatccatgctgctgacctcttgcacaccctcttctacatgcccatcaggcacctg
catgagtatgcccgcgtgctgctcaaacttgcaacctgtttcgaggtggtctccaaggaa
tactacaagctgcaggaagtcagctgtcagtgtgaagcacttggcctatatctgaagaaa
aagcgcaaagaggcagaatacacctacagtttctggaaaacattcccagggaaaatgacg
gattccctgaggaagccggaacgtcgcctcatatgtgagagcagcaaccggggattgacg
ctgcagcacgctggcagattctccattaactggtttatcctcttcaatgatgcgctagtt
cacgctcagttttcaacgcatcatatatttcctcttgtgactctttgggtagagccccac
tttgaagaaaacagcaacttgaacgccctgaaaataaccacagctgaagaacagttcatc
ctcactgcagcttcacctcaggagaagacaaagtggttaagggccattaaccaggctgtg
gatcactcactgagtggtgcccaggaacacgtgaaccctggactggggagccccatgcga
gcagaaccccccatctcgcgtacagctacttacaccttctacaaagacccacggctgaag
gaggcaacttatgaaggtcgctggttgtccggaaaaccacatggcaagggtgtgctgcag
tggcctgatgggagaatgtacaccggtgacttcagaaatggtttagaggatgggtatgga
gagtacatcatacccaacaaaacgctgaagaagaatgatcattatcagggccactggaaa
gaagggaagatgcatggccatggcatctacaaatatgccacgggtgaggtgtacgagggc
tgttttcaagacaacatgcgccatggtcacggtttacttcgtagtggaaagctgacatca
tcttgccccagcatgttcatcgggcagtgggcacaggacaaaaaaatgggctatggtgtg
tttgacgatatcacaaggggtgagaagtacatgggcatgtggttggatgatgttcgccat
ggcaacggagttgtggtcactcagtttggcctgtactacgagggtgccttcagcaacaat
aaaatggtgggctatggtatcctgctctccgaggatgacaccagcttcgagggagagttc
tctgatgactggatcttaaatggaaaggggatcctgaccatgcaaaatggcgattacttt
gaaggatctttcagcggagagtggggcacagggattaaagttgccggaacgtacttcaaa
cccaatttgtatgaagacgacagggagaaatcccgtgtgttgaggttggggaaactggcg
gtgcaccctgatgaaaaatggaaggcgatgtttgatgagtgttggagtcagcttggctgt
gagtgtgctgggcagggcgacatcaagaaggcctgggataatattgcagtttgtctcacc
acgagcagacggcagcacaaggacagccccgatttcaggagtcgatctcatacgcaaacc
ttggagagtttggaagttatccctcagattgtcggccccctcaccttggataaatatgag
accatcaggagatatttaatgaaggcatgtgacacccctctacacccactggggaacttg
ctggagacactggtggcagtgtacagaatgacatatgtgggagtgggtgcaaatcgtcga
ctactgcagcaagcagtcaatgaaatcaagtcctatctaattcgcatcttccagctggtc
agatttctgtttccggatctcccagacggggatagtctgatcccaggaacacacactggc
aaagaagacagcaatgggggaaaggactttgccgaccattggttcccagtgattacgagc
tgtggcctgctccttccagtgctgttacctcggctgtaccctcctctcttcacactctat
gctctcgacaatgagcgggaggaagacatttactgggagtgtgtgctccgactcaacaag
cagccagatctatccctgctcagtttcctgggagtacagccgaagtttatcccagacaca
gtctccatacttggtgagaagaaggaggtacaagccatcacgaaggaggtttgctacgct
tctgctattgaaagtttacagcagatcagcaccaccttcacaccagcggacaagttgaat
gttattcagcagacctttgaggagatcacacaggaggtcctgactatgctgcaagaagac
tttctctggtccatggacgatctcttccctgtcttcctgtacgtggtacttcgagcaagg
atcaggaatctgggctcggaggttcacctaattgaggacctgatggatccttcagtacaa
cacggagagcagggaatcatgttcactacactgaaggcctgttattatcaaattcaacac
gagaagctaacatag
DBGET
integrated database retrieval system
