Scyliorhinus canicula (smaller spotted catshark): 119960334
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Entry
119960334 CDS
T11175
Symbol
hdac4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119960334 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119960334 (hdac4)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119960334 (hdac4)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119960334 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
119960334
NCBI-ProteinID:
XP_038644005
LinkDB
All DBs
Position
2:complement(155486149..156186043)
Genome browser
AA seq
1091 aa
AA seq
DB search
MMTSQSHSDGLSGRDQSIELLTPSRVNHMSSTVDISTALLPQVQPSTPMDLRLDHQFTVP
AADPNVREQQLQQELIALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHIKHQQDLLA
LKHQQEILEQQRKLEQHRQEQEMEKQHREQKLLLLKNKEKGKESAVASTEVKLRLQEFVL
NKKKAAAHRAINHSIPNDPRFWYGKTQHGSLDQSSPPQSSISASYNHPVLGMYDPKDDFP
LRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGSAITTLKKRPMDVPDSACNSAPGSGP
SSPNNSSNNITTENGIAGSATNMPTESTLPHKLVARDGSVTQLPLYTSPSLPNITLGLPA
TGPSSGASGQAEGERVGMQGLPLNTPFIAGTHLPHYIATLDKDGSSGHTPLLQHMVLLDQ
PAPQSPLVTDWYLSELGALPIHPQSLVGPDRVSPSIHKLRQHRPLGRTQSAPLPQNAQAL
QQLVIQQQHQQFLEKHKQQFQQQQIHINKLMPKPSEQPRQHESHPEETEEELREHQAMPE
EPYSDRGVNPNESTAMNKVVQVKQEPIESDEEGEEQHELEQRKRQAEQQQDLLFRQQALL
LEQQRIHQLRNYQASMEAAGIPVSYSGHRPLSRAQSSPASATFPISVQEPPSKPQFTTGL
IYDTLMLKHHCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKASLEELQVVHS
EQHALLYGTNPLNRQKLDSKKLLGSITPMFVMLPCGGLGVDSDTIWNEIHSSXCARLAAG
CVXELVFKVATKELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAXKLLQQRLNVSKILI
VDWDVHHGNGTQQAFLQXSNVLYISLHXYDDGNFFPGSGAPDEVGTGAGVGFNLNMAWTG
GLDPPMGDAEYLTAFRTVVMPIANEFAPDMVLVSSGFDAVEGHPAPLGGYKVSAKCFGYL
TKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPFTQEVLQQRPNPNAVRS
IENVIEIQSKYWKSLQRFSSTVGYSLIEAQKCDKEEADTVTAMASLSMGVKQGSSAEKRP
DDEPMEEEPPM
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctcacaaagccattcagatggactttccggtcgagatcagtcaattgagctg
ctgaccccttcaagagtgaatcatatgtccagtactgttgatataagcacagcattgctt
cctcaagtccaacccagtacaccaatggatcttcggcttgatcatcagtttacagtgcca
gctgctgaccccaatgtacgagaacagcaactacaacaggaattgattgctctaaaacaa
aaacagcaaatccaacgtcagcttcttatagcagaatttcagagacaacatgagcagctc
tcacggcaacatgaagcccaactacaagagcacataaagcatcaacaggacttgcttgca
ttgaagcaccaacaagaaattttggaacagcaacgtaaactggagcagcatcgtcaggaa
caagagatggagaaacaacacagagaacaaaaattactgctgctaaaaaataaagagaaa
ggaaaagaaagtgcagtagcaagcacagaagtgaagttgagacttcaagagtttgtccta
aataaaaagaaagctgcagcacatagggcaataaaccattccattccaaatgacccaaga
ttttggtacggaaaaacccaacatggctcattagaccagagttctccacctcaaagcagc
atatctgcctcatataatcatccagtcctcgggatgtatgatcctaaagatgacttccca
cttagaaaaacagcatctgagccaaacctaaaggtacgctccagactaaaacagaaagtg
gcagagagaagaagtagccctttacttcggagaaaagatggcagtgccataaccacactt
aaaaagagacccatggatgttccagattcagcttgtaacagtgctcctggatctggccca
agctcccccaacaacagctccaacaacatcactacagaaaatgggatagcaggatcagca
accaatatgccaactgagtctactttgcctcacaaactggttgctcgagatggctcagtg
acgcaattgcctctgtatacttcaccatcattgcccaacataactttaggtctgccagcc
acaggtccctctagtggagcctctggccaagcagaaggtgagagagtgggcatgcaagga
ctcccattgaacactccatttattgctggtactcatctgccacactacattgccactttg
gataaagatggcagtagtgggcatacacctctcttgcagcatatggtcttattggaccaa
ccggccccccagagtccactagtaactgactggtatctttcagaattgggagcgttgccc
attcacccacagtcgcttgttggtccagacagagtttcaccttccatacacaagcttagg
cagcaccgtcccttagggagaacgcagtcagcaccgctaccacagaacgcacaggctttg
caacagctggtcatacagcagcaacatcagcagtttctggagaaacataaacagcagttc
cagcagcaacagattcacattaacaagctgatgccaaagccgagcgagcagcccaggcag
catgaaagtcaccctgaagaaacagaagaggagctcagagaacatcaggccatgccagaa
gaaccatactcagacagaggtgtcaatccaaatgagtctacagcaatgaacaaggtggta
caggtcaaacaagaaccaattgaaagtgatgaagaaggggaagagcagcatgagctggag
caaagaaagaggcaggcagagcaacagcaggatctacttttcagacagcaagctcttctc
cttgaacagcaacgtattcatcaacttcgcaattatcaagcatccatggaagcggcaggg
attccagtgtcctatagcggacatcgtccactctcccgagcgcagtcatcacctgcttct
gccacttttccgatctctgttcaagaaccacccagtaaacctcaattcactacaggtcta
atatatgatacactgatgctaaaacaccattgtacctgtggaaatacaaacagtcatcca
gaacatgctggcagaatccagagtatatggtctcgactccaagagactggcctacgcagc
aaatgtgagtgtatcagaggaaggaaagcgtcactggaagaactacaggttgtccattcg
gagcagcatgcattactttatggcacaaacccattgaatcgacagaagcttgacagtaag
aaactgctaggttccatcaccccgatgtttgttatgcttccttgtggcggtcttggagtt
gacagtgatacaatttggaatgagatccactcatctnagtgcgcacgcttggcagcaggc
tgtgtgnatgagcttgtttttaaagtggcgactaaggaattgaagaatggatttgcggtc
gtgagacctcctggacaccatgcagaggagagcacaccaatgggattctgctacttcaat
tccgtggccattgctnacaaactcttgcagcagaggttgaatgtcagcaaaatccttata
gtggactgggacgtgcatcatggtaatggcacccaacaggcttttctacagtgatccaac
gtgctgtacatttcattgcatnagtatgatgatggcaacttcttccctggcagtggagcc
ccagatgaggttgggactggcgcaggggtagggtttaacctcaatatggcctggactgga
ggtctggatccaccaatgggcgatgctgaatatttgactgcatttaggacagtagtgatg
cccattgccaatgaatttgcccctgatatggtacttgtgtcctctggatttgatgcagta
gaagggcaccctgcccctcttgggggttacaaagtctccgctaaatgttttggctacctt
accaaacagctgatgggcctggctggaggccgtgtcgtgctagccctggaagggggccat
gatctcactgccatttgtgatgcctcagaagcatgtgtttctgctttacttggaaatgag
cttgagcctttcacacaagaagtgttacagcaaagaccaaatcccaatgctgttcgttct
attgagaacgtaatcgaaatacaaagtaaatactggaagtcgctgcaacgcttttcctct
actgtgggctattcactgatagaggcgcaaaagtgtgataaggaagaagctgacacagta
acagctatggcttcattgtcgatgggtgttaaacaaggatctagtgctgagaagaggcca
gatgatgaacccatggaggaagaaccacctatgtag
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