Scyliorhinus canicula (smaller spotted catshark): 119960883
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Entry
119960883 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119960883
Membrane trafficking [BR:
scau04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119960883
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119960883
NCBI-ProteinID:
XP_038644399
LinkDB
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Position
Unknown
AA seq
613 aa
AA seq
DB search
MKLTRPGGRTLLPVVWPPLLPLLLLLGPGLGCPSDCLCWSPNRTVSCSSRGLEALPRGIP
AGTRALDLSGNRLERLDWGPARGLSRRLEELELGHNRLRELEAGALGGLERLRRLGLGHN
LLRYLQPGALRGLAALHSLELAGNPLLLLSDHTFRGLAALRTLSLGSPELAWAGPQAWAG
LSGLNQLTVRGAALAWPPGPVLSPLLNLTALRLLAFPKATALPGRPFQGLSRLRLLEIDS
WASLAQLGPDCLLGLNLVWLSVTRCNLSDVPYASLRTQAYLRFLNLSHNPITAIRGALLQ
HVTRLEELRLVGGRLRVIHDAAFRGLIYFRLLDVTANQLASLPATAFRSLASLQSLGLGL
NPLACDCRLLWIVRRRHRLRFLGSQPPRPQRLQAREGQTITLRCSADGQPLPLILWLNPR
RQRLGHPEAGMGLPGGLGLIAEDQGLNPEDRGLLPGRPDPSLPPAPPLLSGPAVGRSRLL
PDGSLQITSVRRMDSGTYRCVARNAGGNATASASLQVRPLSLQXAGTGWALRLPGQGRPR
PGYPFDTHTLLVATTMGFTSFFTVVSLCFTLLFIWSRVSGPIKHNIHVDFVPHAGGGGGG
SSGDDAKYNMKMV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttacgaggccagggggcaggacgctgttgccggtggtgtggcctcctctcctc
cccctgctcctcctcctgggtccggggctcggctgcccctccgactgcctctgctggagc
cccaaccggacggtgagctgctcgtcccgggggctggaggcgctgccgcgggggatcccg
gctggcacacgggcgctggacctgagcggcaaccggctggagcggctggactggggcccg
gcgcgaggcctgagccgtcggctggaggagctggaattgggccataaccggctgcgggag
ctggaagccggcgccctgggtggcctggagcggctaaggcgcctgggcctaggccacaac
ctcctgcgctacctgcagcccggagccctccgcggcctggccgccctccacagcctggag
ctggccggcaacccgctgctgctgctcagcgatcacaccttccgcggcctggccgccctg
cgcaccctcagtctgggctcccccgagctggcctgggccggcccgcaggcctgggcaggc
ctcagcggcctcaaccaactcaccgtccgcggcgccgcgctggcctggccgcctgggcct
gtcctctcccccctcctcaatctgaccgccctccgcctgctggcctttcccaaggccacc
gccctgcccggccgccccttccagggcctctcccgtctccgcctgctggaaatcgactcc
tgggcctcactggcccaactaggccccgattgcctcctgggcctcaatttggtctggctc
tcagtcacccgctgcaacctcagcgacgttccctatgccagcctgaggactcaggcctac
ctgcgcttcctcaacctctcccacaatcccatcactgccatccgcggagcgctgctgcag
catgtgacccgcctggaggagctgcgattggtgggcggccgcctgcgcgtcatccatgac
gccgccttccggggccttatctacttccggctgctggacgtcacggccaatcagctggcc
agcctgccggccaccgccttccgctcgctggcctccctccagagcctgggcctcggcctc
aacccgctggcctgcgactgccgcctgctctggatcgtccgccggcgccatcgcctccgc
ttcctgggctcccagccgcccaggccgcagcggctgcaggcccgagagggccagaccatc
accctgcgctgctcggctgacggccagccgctgcccctcatcctgtggctcaacccacgg
cgccagcggctaggccaccccgaggctgggatgggcctccccgggggcctgggcctaata
gccgaggaccagggcctgaaccccgaggaccgcggcctcctccccgggcgtccggacccc
agcctgccccccgcgcccccgctcctctctggccccgctgtgggccgcagccgcctcctg
ccggacggcagcctgcagatcacctcggtccgccgcatggactccggcacctaccgctgt
gtggcccgcaacgccggcggcaacgccacggcctcagcttcgctacaggtgcggccgctc
tcgctgcagngagctgggactggctgggcgctccgactcccgggccaaggccggccaagg
cccggataccccttcgacacccacacgctgctggtggccaccaccatgggcttcacctct
ttcttcaccgtggtgtcgctctgcttcactttactcttcatctggagccgggtcagcggg
cccatcaaacacaacatccatgtcgacttcgtgccgcacgctggcgggggcggcggaggc
agcagcggggatgacgccaaatacaacatgaagatggtctga
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