Scyliorhinus canicula (smaller spotted catshark): 119961868
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Entry
119961868 CDS
T11175
Symbol
hnrnpa3
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119961868 (hnrnpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119961868 (hnrnpa3)
03041 Spliceosome [BR:
scau03041
]
119961868 (hnrnpa3)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119961868 (hnrnpa3)
mRNA cycle factors
Common to processing body (P body) and stress granule
119961868 (hnrnpa3)
Spliceosome [BR:
scau03041
]
Common components
Common spliceosomal components
hnRNP proteins
119961868 (hnrnpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
119961868
NCBI-ProteinID:
XP_038645250
LinkDB
All DBs
Position
2:complement(198220738..198247274)
Genome browser
AA seq
383 aa
AA seq
DB search
MDAVWEGQEPKEPEQLRKLFIGGLSFETNEESLKEHFEQWGLLTDCVVMREPQTKRSRGF
GFVTYSCVLEVDAAMSARPHKVDGRVVEPKRAVSREESTKPGAHLTVKKIFVGGIKEDTE
EYHLRDYFEKYGKIENIEVMTDRGSGKKRGFAFVTFDDHDSVDKIVVQKYHTVNGHNCEV
RKALSRQEMQGLGSGQRGRNGSGGGNSPSHYMSRGGGNFGNGGGNFNRGGNFSGRGMGNF
GGGRDDYGGSGAGGYNGFGDGGNFGGGHSYSGRGGGGGGGYGGSGPGFGNQSGGGGGGYG
SGGGGGYDSYNEGGNFGGNFGGGGGGSSGNYNDFGNYPNQSSNYGPMKNNNYGRNSGPYD
GGYGSGGGGGGSGGGSGGYGRRY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagtgtgggagggtcaagaacctaaagaaccagagcagttacgcaagctgttc
attggtggattgagttttgaaactaatgaagagagtttaaaggagcactttgaacaatgg
ggactgttaacagattgtgtggtgatgagggaaccacaaacaaaacgttcaagaggattt
ggatttgtgacttattcttgtgtattggaggtggatgcagctatgtctgcacggccacac
aaagttgatggtcgtgttgtagaaccgaaaagagcagtgtcaagagaggaatctacaaaa
cctggtgcccatttaacagtgaaaaaaatatttgttggcggtatcaaagaagatactgag
gagtatcacctgagagattattttgaaaagtatggcaagattgaaaatattgaagtcatg
actgatcgtggaagtgggaaaaaacgaggatttgcctttgtcacatttgatgatcatgac
tccgttgacaaaattgttgttcaaaaataccacactgtaaatggacacaactgtgaagtg
agaaaagcactttcacgacaggagatgcaggggcttggatctggccaaagaggacgtaat
ggctctggaggtggaaatagccctagccattacatgagccgtggtggtggaaattttgga
aatggaggaggaaattttaaccgaggaggaaatttcagtggcagaggaatgggcaacttt
ggaggcggacgtgatgattatggagggagcggtgctggtggatataatggattcggtgat
ggtggcaattttggaggtggccacagttacagtggtagaggaggaggaggaggaggagga
tatggcggtagtggcccaggttttggcaaccaaagtggtggtggtggaggaggatatggt
agtggtggtggtggcggctacgacagctacaatgaaggtggaaactttggaggaaatttt
ggtggtggtggtggtggcagcagtgggaactacaatgactttggaaactatcctaaccag
tcatcaaattatggacccatgaagaataacaattatgggcggaactctggtccctatgat
ggtggttatggatctggtggtggtggtggtggaagtggcggaggaagtggtggctatggt
agaagatattga
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