Scyliorhinus canicula (smaller spotted catshark): 119962103
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Entry
119962103 CDS
T11175
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119962103 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119962103 (mbd6)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119962103 (mbd6)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
119962103 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
119962103
NCBI-ProteinID:
XP_038645904
LinkDB
All DBs
Position
2:258269700..258641297
Genome browser
AA seq
1688 aa
AA seq
DB search
MNGASENDGEKDGGGPAIQVPIGWQRQVDQNGVLYMSPSGSVLACIEQVKTYLLTDGTCK
CGLECPLILSKVFTFDPGATVKQRTAEDVKADEDLTKLCIHKRKIIAVATLHKSIERPHP
SLLLTSPGGGASGSPMVQSRAATPRAVRNKSQEVMVNSTVPDYKNTFLPKLMTGVPNAAT
RIYQQELCRSPQQELHVYSRQRLGSNDQGQKSPYRGSHGGLSSPASSGSQIYGDGSISPR
TDTVGSPDVFTRSNLGFHAGPNSSPIHANRIPHSPPTVLMQNSSSHPSCALAGRTSIPLS
PTMTTKSPVMKKPSCNYSSNIDMPRIMFHKPPQGAPTSCALQKKPLPSEMDPLGILDPIP
SKPNLVLMNASNFPTTMHSQVPMMNVNMPPAVVPLPSNLPLPTVKPGPINHGTHVPRVQH
STSTSVSPAPVTSPIHMMGPVMGRIEASPQRSRSSSTSSDHGSLMMPPAGPQSSCSGIKV
PPRSPRSSMGSPRPSMPSSPSTKPDGLLHQYKDIPNPLLVGMNNVLNPQSNLLFPSVSVG
NVQQQKGQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLSGSNSSGGVGSG
GNSEGHSTLNTMFPPTANMLLSVNEGQSGRAALRDKLMAQQKDPLRKRKQATPTVLSMLK
QSQMGNSGVPKSVIDSLRKQGQNSSVTMNNTMSQLLQSMSSQSSQISGNSSTSCGSSTAG
ISCSSNQHNFSNTSLNSGSIHNLSAQNLTRGEGISCQNTSTNLIHSCQGPNNQFVGIVGP
LHGSGNCGLLHQSAMTLGNSLHSNHHSRIAASSAVMVPNSSGICSQTSADTGGQEGPSHG
HLHRRQRCSLVNLSGGSSGQLASMAVAGTNQLAITKTTSVLQDGVIVTTAAGNTMHSQLP
MGSTLPFVGQDQAFQFGQAVPTSSNLTHPLNPNLLGSLSIPLTMNQQQLLNQNMLNMLPS
SGDGKGEVSVNPLGILNPNLNAALTLLPGDMAGQTLQPVQLLATLFQNQAQATMLPLTSF
NLTLPDLLQQQNHPSPSVTQIQSLQDRLHSNQLVNNRTETLLTNPLPNLSNNDTTTNPLL
LPAVTAAPGLMALNPHLLRSVLHSPSDRAAHHSEVSIATSSQATTTTTTSSSVAALAVST
LGGTAVMSMAESLLPISAAGHATGPTKLNNSLIPHLPLLGASLLGDVPSFNNSLNNPQLS
RLQTLINSNQMFPQNHQLLQGLQGTRGLQGFQGHPSFSVPGNPPNPMACVFQNFQVSPAQ
NVSLSNAPGTHPGTILLSEGSQTALPPFHDLSGSQHRIVPTQGQQGREEVPTVGPHDHSV
DAIYKAVVDAASKGMQVVITTAMSSTSQMSPIPALSAMSAFTASIANPVNLSNAVNAVIH
GKRLSSMEIDSRINSQNILSNRHARGVKLRRNSEQAKIAPDGEGFEYFKSPGRITPKKQW
ETEQLAVGDATVWKCEKFLEHSGQINHSPSAERIPSFHGEQTDAVLQQKNCHLDKRFLED
SFRFNSQKRHIVKIKERLENTLERCTHLNGNRSQQNRNFGELLTAPKQELAIEEQSPSSS
ASLEGMPGSLAHDYIQYNGDYNSETINGCAPSPSDTKSISSDDDLKIPDSPSNDLIHYRP
RTFNVGDLVWGQLKGFPSWPGKLVREGEVHNSCQQNSEEGKVNNTVHQTPQKERQVKSPK
AKRRKISR
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagcaagtgagaatgatggtgaaaaagatggtggtggaccagcaatccaagtt
cctataggatggcagcggcaagttgaccagaatggagtactgtacatgagtccaagtggc
tcagtgttggcctgcatcgagcaagttaaaacctatctgcttaccgatggaacttgcaag
tgtggcttggagtgtcctcttattctttcaaaggtgttcacttttgatcctggagcaact
gtgaaacaaagaacagcagaggatgtaaaagctgatgaagatttgacaaaactttgcatc
cataaacgaaaaataattgcagtagctacactacataagagtattgagaggccacatcct
tccctgcttctaaccagcccaggcggtggagcaagtggctctcctatggtacagtcacgg
gctgcaacaccaagagcagtgaggaataaatcacaagaagtaatggtgaattccacagtg
ccagactataagaatacgtttctgcctaaattgatgacgggggttccaaatgctgcgaca
cggatttatcaacaggaactgtgtagaagtccccagcaagaacttcatgtttattccagg
cagagactgggcagcaatgatcaaggacagaagtctccgtatcgtggaagccatggtggt
ctatctagcccagcatcatcgggatcacaaatctatggagatggttctatatctcctagg
actgatacagtgggaagccctgatgtatttacgagaagtaatctcggctttcatgctggg
ccaaactccagtcctattcacgcaaatagaattccccattcaccacccacggttctgatg
caaaactcttcgtcccacccatcctgtgctctggctggtaggacttctatacctctttca
ccaacaatgactacaaaaagccctgtaatgaaaaaaccctcttgtaattattcatcaaac
attgatatgccaagaattatgtttcataaacctccccaaggtgccccaacatcatgtgct
ctccaaaaaaagccattgccctctgaaatggatccattaggcatccttgaccccataccg
agtaaacctaacctagtacttatgaatgcatctaatttcccgacaaccatgcactctcag
gtacctatgatgaatgtaaacatgcctccggctgttgtccctttgccaagcaacctacca
ttgccaactgttaaacccggccctataaaccatggaactcatgtaccaagggtacagcat
tcaacatcaacatctgtatctcctgctccggtcacctcccccatacacatgatgggacct
gtcatgggaagaattgaggcgtcaccacagcgatcaaggtcatcttctacatcctctgac
catggaagcttaatgatgccacctgcaggtccacagtcaagctgcagtgggataaaggtt
cctccaaggtcaccaaggtcatctatgggttctcctcgaccatctatgccatccagtcca
tccaccaagcctgatgggcttcttcatcaatacaaagatattcctaatccattgttggtt
ggaatgaacaatgttctaaatcctcaaagtaacctattgtttccatctgtatctgttgga
aatgtacaacaacaaaaaggtcagccaggtttgctcggaatgcccttaaatcaaattttg
aaccagcataatgctgcctcatttccagcaagcagtttactttcagcagcagccaaagca
cagctagctaatcaaaacaaactgtctggtagtaacagtagtggtggagttggcagtggt
ggcaacagtgaaggacacagcactttaaataccatgtttccaccaactgccaacatgctt
ctttcagttaatgaaggtcagagtgggcgtgcagcactgagggataagctaatggcacag
caaaaggatcctttaaggaagcggaagcaagcaacacccacagtgttgagtatgctaaaa
cagtctcagatgggcaactctggtgtcccaaagtctgtgattgactctctaaggaaacaa
ggacaaaattcatctgtaaccatgaataacaccatgtctcagttacttcaatctatgagt
tcacaaagttctcaaatcagtggcaatagcagtactagttgcggtagttctactgcaggt
atttcttgttcctccaaccaacataacttctcaaataccagtctgaactcaggttccatt
cataacctatcagctcaaaatttaacaagaggggaaggtatttcttgccaaaatacaagt
actaatttaatccacagttgtcagggcccaaacaatcaatttgttgggatagtcggaccg
ctccatggtagtggcaattgtgggctgcttcatcagtctgcaatgactttgggaaatagt
ttgcattctaaccatcattcaagaattgcagcctcttcggcagtaatggttccaaacagc
agtggcatttgtagccaaaccagtgctgacacaggagggcaggaaggtccatcccatgga
catctccacagacgacaacgttgttctttggtcaacctgtcaggaggtagttctggccag
ctagcatccatggccgttgctggtaccaaccaacttgccattaccaagacaacatccgtt
ctacaagatggagttatagttacaacagcggctggaaatacaatgcacagtcaacttccc
atggggagcactcttcccttcgttggtcaggaccaagcttttcagtttggacaggctgtc
cctacgagtagcaatcttacccaccctttgaacccaaacctccttggctctctgtccatc
cctttaacaatgaaccaacaacagctcctgaaccagaatatgctgaacatgttgccttca
tctggagatggcaagggagaagtctctgttaaccctttgggaatcctgaatccaaattta
aatgcagctttgactttgctccctggtgatatggctggacagactttgcaacctgttcaa
cttttggcaacattgtttcaaaaccaggcacaagctaccatgctcccactgacatctttt
aacttgactctcccagatttattacaacagcaaaaccacccttcaccttcagtgacacag
atccagtccttgcaagatcgtttgcatagcaatcagttagttaataacaggacagaaacc
cttttgacaaatcctctgccaaacctttcaaacaatgacactactacaaaccctcttctc
ctcccagctgtcacagcagccccaggactgatggctctgaatccccatctgttgagaagt
gttttgcactctccctcagaccgtgctgctcatcattctgaggtttccatagcaacctca
tcccaggcaaccactaccaccaccacgtcgtcatcggtcgctgcacttgccgtctcaact
cttggtgggacagcagttatgtcaatggcagaatcgttgctacccatttcagctgctggg
catgcaacaggacctacaaaactgaacaactctctgataccacacctacccttgctggga
gccagccttcttggtgatgtaccttcattcaacaacagtttgaacaatccacaattaagt
cgcctccagactttgatcaacagcaatcagatgtttcctcagaatcatcaacttttacaa
ggtttgcaagggactcggggcctacagggctttcaaggtcacccttcattttctgtccct
ggtaacccaccaaaccccatggcatgcgtttttcaaaactttcaggtgagtccagcgcaa
aatgtctcactttcaaatgccccaggaacccacccaggaacgatattgctatccgaggga
tcccaaactgctcttccccccttccatgatctgtctggtagccaacatcgaatagtaccg
actcaaggtcagcaaggcagagaagaggtcccgactgtgggtccccatgaccattctgtt
gatgctatatataaagccgtggtggatgctgcaagcaaaggaatgcaggtagtgatcact
acagcgatgagtagtacttcacaaatgagcccaatcccagccctgagtgccatgagtgcc
tttactgcttccattgcaaaccctgtgaatctttcaaatgctgtcaatgcagtgattcat
gggaaaagactttccagcatggagattgacagccggatcaacagtcaaaacatcctctca
aataggcatgccagaggagtgaagttgaggagaaattctgaacaagcaaaaattgctcca
gatggggaaggattcgagtacttcaaatcaccaggtcgcatcactcctaaaaaacagtgg
gaaactgagcaacttgcagttggtgatgcaacagtgtggaaatgtgagaaatttctagaa
cactctgggcagataaatcatagtccttcagcggaaaggataccttctttccacggggaa
cagactgatgcagtattacagcagaaaaactgccacttggataaacgatttcttgaggac
agctttaggtttaatagtcaaaaaagacacattgttaaaattaaagaaagactagagaac
actttggaaagatgcacacacctcaatggaaatcggtctcaacagaacaggaactttggt
gagttgctaacagcccccaaacaggaactagccatagaggagcaatctccaagttcctcg
gccagtttggaggggatgccaggttccttggcacatgactatattcagtacaatggagat
tataattcagaaaccataaatggatgtgccccaagtccttcagatactaaaagcatcagc
agtgatgatgatttgaaaattccagattctccatctaacgatttaatacactatagacca
aggacgtttaatgttggtgacttagtctggggtcaattaaaaggatttccttcatggcct
gggaaattggtgagggaaggcgaagtacacaattcctgtcagcaaaactctgaagaggga
aaggtaaataatacagttcaccagacaccgcagaaggagaggcaagtcaagtcaccaaaa
gccaagaggcgaaaaatctctagataa
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integrated database retrieval system
