Scyliorhinus canicula (smaller spotted catshark): 119962125
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Entry
119962125 CDS
T11175
Symbol
clasp1a
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119962125 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119962125 (clasp1a)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119962125 (clasp1a)
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
119962125 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Adaptin_N
HEAT_DAAF5
Sec7-like_HUS
ParcG
UTP20
RTP1_C1
MMS19_N
MMS19_C
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
119962125
NCBI-ProteinID:
XP_038645962
LinkDB
All DBs
Position
2:263887723..264245411
Genome browser
AA seq
1497 aa
AA seq
DB search
MEHCMEYFLAQVLQKDMGRRLQIAQELIEYITDRQKSHDLEQDQSMLDRMVDGLAAGWVN
SSNFKVALFGIEILSTLITRLQDHFKTHVGTVLPSLIDRLGDAKDPVREQDQILLLKIME
LAATPQYVWERMLGGFKHKNFRTREGICLCLISTLNSYGAHSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYKHVGERVRADLHKKGLPQSRLNVIFAKFDEVQKSGHMALSSTADK
HFDDEDSVDGNRPSSASSTSSKAPSSRRPIGTGRRPGSAAVGSRSGTVKDGAGAVDEDDF
IRAYEEVPTVQIYSNRDLEESINKIREVLSDDKHDWEQRVIALKKIRSLVLAGATEYECF
FQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNRFDHGAEAIMPTLFNLVSNSA
KVIATSGIAAIRLIIRHTHFHRLIPVIASNCASKSVAVRRRSFEFLDRLLLEWQTHSLEK
HVALVAETIKKGIHDADSEARLEARKLYWDFRSHFSKEAEILFNSLEPAYQKPLQSHLKN
SDSIVSLPQSDRSSSSSQESLNRPLSTKRSPTGSTVSRASTVSAKSVSNTGALQRSRSDI
DVNAAANAKSRLTATPSNTPGHFSSAAALPPGSYASLGRVRSRRQSAGSATSVASTPSDT
RGRSRAKVVSQSQPGSRSSSPGKLLGSTYSGMSSGPQRVSVVPQTSEKRSKIPRSQGCSR
EASPNRLGLARSSRIPRPSMSQGCSRDTSRESSRDTSPVRGFVPLDRHGLGQAGRLPPTV
NALRVLNTSTEVEAAVADALLLGDSRTKKKPVRRRYEPYGMYSDDDANSDASSACSERSY
GSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLVGLQNLLKSQRTLSRVELKRLWEI
FTRMFADPHSKRVFSMFLETLVDFIIIHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQ
KALDVTRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIERLARQMDPADFVNSSET
RLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNH
LKNSSNTSVSSPSNTMGRTPSRHASSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIY
SSLRGVTQAIQNFSFRGQEDLNEPIKRDGKKDCDGDGGIAAPSSDIRGGGETMEGGRTAL
DNKTSLLNTPPPRSFSGPRARDYNPYNYSDTINVFDKTALKEAMFDDDMEQLRDVPIHHS
DMVADLLKELSNHNERVEERKAALLELLKITREDTLGVWDEHFKTILLLLLETLGDKDHS
IRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPE
QCIKVLCPIIQTADYPINLAAIKMQTKVTERIAKESLHQLLPDIIPGLLQGYDNTESSVR
KASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggagcactgcatggaatatttcttggcacaagtgctgcagaaggatatgggacgtcgg
ctacaaattgctcaggagctgattgagtacatcacagatcgccagaagtcccatgatctg
gaacaggaccaatcaatgcttgatcgaatggttgatggccttgctgctggttgggtaaac
tccagtaacttcaaggttgctttgtttggtatagaaattttatccaccctcattacacgt
cttcaggatcactttaaaacgcacgttggtacagtcctaccaagtctaatagacaggcta
ggagatgctaaggatccagtgagagaacaagatcagattctcctgctgaagattatggaa
ctggctgctacccctcagtatgtctgggaacgaatgctaggaggatttaaacacaagaat
tttcgaaccagagaagggatttgtctttgccttattagcacattaaattcttatggagct
cacagtttaactctaagcaaaattgtaccccatatctgtaatttattaggagatccaaac
agtcaggttcgagatgcagcaataaatagtttagtagaaatatacaagcacgtaggagag
agagtccgagcagatcttcataaaaaggggttaccacaatcaaggttgaatgtcattttt
gcaaaatttgatgaggttcagaaatcaggacatatggctctctcttcaacagctgacaaa
cattttgatgatgaagattctgtggatggaaacagaccatcttctgctagctccacatcg
tcaaaagctcccagttcacggcgtccaattggtactggtcgtcggccaggatcggctgca
gttggttcgaggagtggaacagtcaaagatggtgcaggtgctgtcgatgaggatgacttt
atccgtgcatatgaggaagttccaacagtgcagatttattccaacagagaccttgaagaa
tccatcaacaaaattagagaagttttatcagatgataagcatgactgggagcagcgagta
attgctcttaaaaagattaggtctttagtgttggctggagcaacagaatatgaatgtttc
tttcaacatctacgactattagacggagcattcaaattatcagccaaagacctgcgctct
caagttgtacgtgaagcttgtataacattggggcatctctcatctgttctgggaaatcgt
tttgatcatggtgcagaagccattatgccaacattgttcaaccttgtttctaatagtgcc
aaagtgatagctacttctggtatagcagcaataagattaattattcgacatacgcacttc
cacagattaatacccgttatcgcgagcaactgtgcatcgaagtctgtggcagttcggagg
cgttcatttgaatttttggatcgactgctactggaatggcaaacacactcactagaaaag
catgtagctcttgtggctgaaacgataaagaagggtatccatgacgctgattcggaggca
agactcgaagctcgaaaactgtattgggattttcgcagtcatttcagtaaagaagctgaa
attttgtttaactcattggaacctgcctaccagaaacctctacagtcccatttgaaaaat
tcagacagtattgtttccttgccacagtctgatcgttcatcatccagttcacaagaaagc
ttaaatcgtcccctgtctacaaagcgcagtcctactggaagcactgtatcacgagcttca
acagtcagtgcgaagtctgtgtctaatacaggagctctgcaacgctctcgcagtgatatt
gatgtgaatgcagctgcgaatgccaaatcacgcttgactgccactccaagtaatacgccc
ggacatttcagctcagcagcagctctacctccagggtcctacgcttctctaggtcgagtg
cgctctagacgccagagtgctgggagtgccaccagtgtagccagtacaccctctgatacc
agaggccgtagccgagctaaagtagtatctcagtcccaacctggaagcagatccagctca
cctggaaaactccttggaagcacatattccggcatgagcagcgggcctcagagggtatct
gtagtacctcaaacatccgagaaacgcagcaaaatccctcgcagtcagggctgcagtagg
gaagccagccccaacagattgggcttggcacggagcagccgtatccctcgaccaagcatg
agtcagggatgcagccgcgatacgagccgtgagagtagtcgagatacaagccctgttcgg
ggcttcgtgccacttgatcgtcatgggcttggacaagctggtcggttgcctcccacagta
aatgccctgagggttctcaatacaagcacagaggtggaggctgcagttgcagatgccttg
ctattaggagactccaggactaagaaaaaacctgtcagaagacgatatgagccatatgga
atgtactctgatgatgatgcaaacagcgatgcatctagcgcgtgttcagagcgttcttat
ggctccagaaatggaggcattccacactacctgcgccagacagaggatgtggctgaggtt
ttaaaccactgtgcaagctcaaattggtctgagaggaaagaaggacttgttggccttcaa
aatctattgaaaagtcagaggacattaagccgtgttgaattgaagcggttgtgggagatc
ttcactcgcatgtttgcagatcctcatagcaagagagtattcagcatgtttttggaaact
ctagtagatttcatcatcatccacaaggaagacctacaggattggctgtttgtgctcctg
actcagcttttgaagaagatgggtgctgatttgctcggttctgtacaggccaaggttcag
aaggcactagatgtcaccagagagtccttcccatttgatcagcagttcaatattcttatg
cgttttattgtggatcaaactcaaacgcctaacctcaaggttaaagttgcaatcttgaag
tacattgagagactggcacggcagatggacccagccgattttgttaattccagtgagacc
cgccttgctgtttcccgaatcataacctggacaaccgaaccaaagagctctgatgtgaga
aaggctgcgcaggtcgtgctgatatctctgtttgagctgaatactcctgagttcacaatg
ttacttggtgccttgccaaaaacattccaagatggtgccaccaagctccttcacaatcac
ttgaagaactctagcaacactagtgtgagttcacctagcaacacaatgggacgcacacct
tcacggcacgcgagcagccgaacaagccctctgacttcgcctacaaattgttcgcatggt
ggtctttccccaagcatgttggactatgacacagaaaatcttaactccgaagaaatttat
agctctctccgtggggtcacacaagctatccagaactttagtttccgcggtcaagaggat
ttgaatgaacctattaaacgggacggaaagaaggactgcgatggggatggaggaattgct
gcaccatcctctgacattcgtggaggaggtgaaactatggaaggaggaaggactgctctt
gacaacaaaacatctttacttaacactccgccaccacgctctttctctggacctcgggct
agagattacaatccatataattattcagatacaatcaatgtgtttgacaaaacagccctc
aaagaagctatgtttgatgacgatatggaacaactccgtgatgttcccattcaccattcg
gatatggttgctgaccttctgaaagaactttccaaccacaatgagcgagttgaagagcgg
aaggcagcactactggaactcttaaaaataaccagagaggatacactgggggtgtgggac
gagcacttcaagactattctacttttgctcctagagactctaggagacaaggatcactcc
attagagcattggccttaagagttctacgagaaattctgcgcaatcaaccggcaaggttt
aaaaactacgcagaactaacaattatgaaaacgctagaagcgcacaaagattcccacaaa
gaggtggtaagagctgcagaagaagctgcttccactttggcaagctccattcatcctgaa
cagtgcatcaaagtactctgcccaatcatccagacagctgactaccccatcaatctagct
gccattaagatgcaaacaaaggtgacagagaggatcgcgaaggaatctcttcatcagctt
ctcccagacatcatcccagggttgcttcaggggtatgacaacacagaaagcagtgtgcgt
aaagcaagcgtgttttgcttggtggcaatttattctgtaattggagaagagctgaaacct
taccttgcacagctcacaggaagtaagatgaaattattaaatttgtatataaaaagggcc
cagacgacaaacagcaacagtagctcatcgtcagatgtgtcgagtcatagttaa
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integrated database retrieval system
