Scyliorhinus canicula (smaller spotted catshark): 119962186
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Entry
119962186 CDS
T11175
Name
(RefSeq) tubulin alpha-1D chain
KO
K07374
tubulin alpha
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04145
Phagosome
scau04210
Apoptosis
scau04530
Tight junction
scau04540
Gap junction
scau04814
Motor proteins
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119962186
09143 Cell growth and death
04210 Apoptosis
119962186
09144 Cellular community - eukaryotes
04530 Tight junction
119962186
04540 Gap junction
119962186
09142 Cell motility
04814 Motor proteins
119962186
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119962186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119962186
03036 Chromosome and associated proteins [BR:
scau03036
]
119962186
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119962186
04147 Exosome [BR:
scau04147
]
119962186
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119962186
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
119962186
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
119962186
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119962186
Exosomal proteins of other body fluids (saliva and urine)
119962186
Exosomal proteins of colorectal cancer cells
119962186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
119962186
NCBI-ProteinID:
XP_038646068
LinkDB
All DBs
Position
2:280463447..280473789
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
RLRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSIEGEGEAEEGEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccatgttggccaagccggtgtccagatgggcaatgcctgc
tgggagctgtactgtttggaacatggtatccagcctgatgggcagatgcccagtgataag
accattggaggtggtgatgactccttcaacaccttcttcagtgagactggagcagggaaa
cacgtcccgcgagctgtctttgtcgatttggagccgactgtgattgacgaggtccgtact
ggtacctatcggcagctgttccaccccgagcaactcatcaccgggaaggaagatgcggcc
aacaactacgctcgagggcactacaccatcggcaaggagctgattgacttagttctggac
agacttcgcaaattggctgaccagtgcacaggactccagggtttcctcattttccacagc
tttggtggaggcaccggctccggtttcacctccctcctgatggaacgtctctccgtcgac
tacggcaagaagtccaagctcgagttttccatctacccggctccccagatctccacagct
gtagtggaaccctacaactccatcctgaccacccacaccacactggaacactcggactgc
gccttcatggtagacaatgaagccatctatgatatctgccgcagaaacctggacattgag
cgcccaacatacaccaatttgaaccggctgattggtcagattgtgtcctccattacggcc
tcccttcgctttgatggtgctttgaatgttgatctgacagagttccagaccaatttggtt
ccctatccacgtatccacttccctctggctacctatgcccctgtgatctcagctgagaaa
gcttaccatgagcaactatcagtgtctgaaatcaccaatgcctgctttgagccagctaac
cagatggtcaagtgtgaccctcgccatggtaagtacatggcttgctgtctgctctaccgt
ggtgatgtggtgccaaaggatgtcaatgctgccattgccaccatcaagaccaaacgcacc
atccagtttgtggactggtgtccaactggtttcaaagtgggcatcaactaccagcctccc
actgtggtgcctggaggtgacctggccaaggtgcagcgtgctgtgtgtatgctgagcaac
actacggccatcgctgaagcctgggctcgcctcgatcacaagtttgacctgatgtacgcc
aagcgcgcctttgtgcattggtatgtgggtgaggggatggaggaaggggagttctcagag
gcccgtgaagacatggcagctttggagaaagattacgaagaggttggcactgacagcatt
gaaggtgaaggagaggcagaagaaggtgaggaatattag
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