Scyliorhinus canicula (smaller spotted catshark): 119962187
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Entry
119962187 CDS
T11175
Name
(RefSeq) tubulin alpha-1D chain-like
KO
K07374
tubulin alpha
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04145
Phagosome
scau04210
Apoptosis
scau04530
Tight junction
scau04540
Gap junction
scau04814
Motor proteins
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119962187
09143 Cell growth and death
04210 Apoptosis
119962187
09144 Cellular community - eukaryotes
04530 Tight junction
119962187
04540 Gap junction
119962187
09142 Cell motility
04814 Motor proteins
119962187
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119962187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119962187
03036 Chromosome and associated proteins [BR:
scau03036
]
119962187
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119962187
04147 Exosome [BR:
scau04147
]
119962187
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119962187
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
119962187
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
119962187
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119962187
Exosomal proteins of other body fluids (saliva and urine)
119962187
Exosomal proteins of colorectal cancer cells
119962187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
119962187
NCBI-ProteinID:
XP_038646069
LinkDB
All DBs
Position
2:280477028..280488531
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEIRGGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
KLRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITV
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVTSSEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEDQGEEEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccatgttggccaagccggtgtccagatgggcaatgcctgc
tgggagctgtactgtttggaacatggcatccagcctgatgggcagatgcccagtgataag
accattggaggtggtgatgactccttcaacaccttcttcagtgagactggagcagggaaa
cacgtcccacgagctgtctttgtcgatttggagccaactgtgattgatgagattcgaggt
ggtacctatcggcagctgttccaccccgagcagctcatcaccgggaaggaagatgcggcc
aacaactacgctcgtgggcactacaccatcggcaaggagctgatcgatttggtccttgac
aagctccgcaaactagctgaccagtgcacaggactccagggtttcctcattttccacagc
tttggtggaggcaccggctccggtttcacctccctcctgatggaacgtctctccgtcgac
tacggcaagaagtccaagcttgaatttgctatctacccggctccccagatctccacagct
gtagtggaaccctacaactccatcctgaccacccacaccacactggaacactcagactgc
gccttcatggtagacaatgaagccatctatgatatctgccgcagaaacctggacattgag
cgcccaacatacacaaatttgaaccggctgattggtcagattgtgtcctccattacagta
tcccttcgttttgatggtgctttgaatgttgatctgacagagttccagaccaatttagtt
ccctatcctcgtatccacttccctctggctacctatgcccctgtaacctcctctgagaaa
gcttaccatgagcaactatcagtggctgaaatcaccaattcctgctttgagccagcaaac
cagatggtcaagtgtgaccctcgccatggtaagtacatggcttgctgtctgctctaccgt
ggtgatgtggtgccaaaggatgtcaatgctgccattgccaccattaagaccaaacgcagc
atccagtttgtggactggtgtccaactggtttcaaagtaggcatcaactaccagcctccc
actgtggtgcctggaggtgacctggccaaggtgcagcgtgctgtgtgtatgctgagcaac
actacggccatcgctgaagcctgggctcgccttgatcacaagtttgacctgatgtatgcc
aagcgcgcctttgtgcattggtatgtgggtgaggggatggaggaaggggagttctcagag
gcccgtgaagacatggcagctttagagaaagattacgaagaggttggtgcagatagtgtt
gaggatcaaggtgaagaagaagaatattag
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