Scyliorhinus canicula (smaller spotted catshark): 119962696
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Entry
119962696 CDS
T11175
Name
(RefSeq) ciliary neurotrophic factor receptor subunit alpha-like isoform X1
KO
K05059
ciliary neurotrophic factor receptor
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119962696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
scau04050
]
119962696
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
scau00537
]
119962696
Cytokine receptors [BR:
scau04050
]
Interleukin receptor families
IL6/12 receptor family
119962696
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
scau00537
]
Receptors
119962696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FN3_IL27B_N
Ig_3
ig
Ig_2
Ig_5
I-set
Ig_4
FN3_DSCAM-DSCAML_C
V-set
Adeno_E3_CR1
VEGFR1-3_N_Ig-like
LIFR_D4
Motif
Other DBs
NCBI-GeneID:
119962696
NCBI-ProteinID:
XP_038646556
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Position
3:complement(62207983..62567259)
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AA seq
396 aa
AA seq
DB search
MCTHTIANPEVTKCFQVGAASRSLHSNYFWCRLQTYIDQMANIVASAYCVVLAVLVMCAR
GHSGQEGRKFYKRIGSNVTLQCETSDGHSSVIWRFNGHAIDHNEDQPFHGTNLTLRNLDS
IHSGTYSCHEKHNGRLKNQITIHVGNPPVTPTVLCRSNAYPDTFYCTWQLSSPTYIPTEF
DISVRHGEKSIETIKDPNHKNRCNIKFLEMFSTNKYIVTVTAKNALGSNSSTMSFNENSI
VKPDPPEIIEVNTIPDSPSKLEVKWRNPLTWPEPDSIPLKYFLRYKPVILDDWQHVEVTD
VPYHTITDAYKGKEHIIQVAAKDSEVGTWSEWSKAVHATPWTATAPKHDSDENIDNVSEP
LTGTTPSTGANKRKNSSIRVESSMTLFLGMIMILFI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactcacactatcgcaaacccagaagtgactaagtgcttccaggttggagccgct
tccaggtcacttcacagtaactacttttggtgtcggctgcagacatatatagaccagatg
gcaaatattgttgcttctgcctactgtgtagtgctggctgttctggtgatgtgcgctcga
ggccacagcggacaggaaggaaggaaattctacaaaagaattggcagcaatgtaaccctg
cagtgtgagacatctgacggtcattcttcagtgatctggagatttaatgggcatgcgata
gaccacaatgaagaccaaccttttcacggcaccaacctcaccctcagaaacctagattca
atacatagcggaacatacagctgtcatgagaaacacaatggaagactgaaaaatcaaata
acaatccacgttggaaatcctccggtgacaccaacagtgctatgcagatcaaatgcttac
ccagatacattctactgcacatggcagctgtcaagcccaacttatatcccaacagaattt
gacatctctgtaaggcatggagagaagtcaattgagaccattaaggatcccaaccacaag
aacaggtgcaacataaaatttctggaaatgttttctacaaacaagtacatagtgactgta
acagcaaagaatgcactgggatccaactcttcaaccatgtcatttaacgagaattccata
gtgaagccagaccctccagagattattgaagtaaatacaattcctgactctcctagcaaa
ctggaggttaaatggaggaatccattgacctggccggagccggattctatccctctcaag
tacttcctgaggtacaagccagtcattctggatgactggcaacatgttgaggtgacagat
gttccatatcatacgatcaccgatgcatacaaagggaaagaacatattatacaagttgct
gctaaggacagcgaggttggcacctggagtgaatggagtaaggctgtacatgctacaccc
tggacagcaacagcaccaaaacatgattccgacgagaacattgataatgtttcagaacct
ttaaccggtacaacaccaagcactggagccaacaagcgaaaaaacagttcgataagagtg
gaatcatccatgacactatttcttggcatgatcatgattttatttatctga
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