Scyliorhinus canicula (smaller spotted catshark): 119962725
Help
Entry
119962725 CDS
T11175
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119962725 (zfr)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119962725 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
PH_6
zf-U1
Motif
Other DBs
NCBI-GeneID:
119962725
NCBI-ProteinID:
XP_038646633
LinkDB
All DBs
Position
3:72286766..72422161
Genome browser
AA seq
1043 aa
AA seq
DB search
MIPICPVVSFTYVPGRLGEDAKMATSNYFGFAHGGAAQYSQQPATGIAYSHPTTAGSYTV
HQAPVAAHAVTAAYAPAAAATAARPVPAAAAAAAAAAAATAAYGGYQTAHTAADYGYTQR
QQEAPPPPPPVTSQNYQDTYTYVRSTAPAIAYDSKQYYQQPAATAQPQQTAAEAYYQAAA
KAGYSQAATQYTQAQQTRQVTAIKPATPNPTTTFTVYPVSTTVQPAAAAAATVVPSYTQS
GTYSSTAVTYTGATYAGYEAAVYSAASSYYQQQQQQQQQQQKQAAAWAGTTFTKKVPFQN
KQKPKQPPKQPQIHYCDVCKISCAGPQTYREHLEGQKHKKKEAALKTTNQSSNTGTARGI
QNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMVSQTTTTTTAG
TSIKPTPLSQPTGSSSGMTAATATVSTAVKPNQLAAVSVNNVANKLLAAKKAPTPKITFV
GGNKLQTTGITNIIDEVKTPEVKVATPPVQETKSEAVVESMTTLAALQSDVQPVGHDYVE
EVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARK
IQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDIYWRRMEEEHHYWDDRRRMADGYPP
GLLGVRPGMMQPQGPLPPRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSHTERALKLV
SDCITEQDKPKNKEDEKKDAIKDRRDDSQRALKGVMRVGVLAKGLLLRGDKNVNLVLLCA
EKPTGTLLNRIAENLPKQLAATTPEKYEVKCCVPDSAIILTSFAEPKMQVTITLTSPVIR
EENMRDGDVTSVMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLC
QRVPTWGALPSWAMELLVEKVISSASGPLSPGDAMRRVFECVSSGILLPGGPGLYDPCEK
NPSDTLNSVIGQQREDITASAQFALRLVAFRQIHKVLGMDPLPQMNPRFNVRNRKRRRDN
SDGTDGLEAEGKKDKKDFDSGEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgcccagtagtttctttcacgtacgtgcccggccggctaggcgaagat
gccaaaatggctaccagtaactactttggatttgcccatggtggtgctgcgcagtacagc
caacagccggccacgggcattgcatactcacatcctaccacagctggcagctatacagtc
catcaggccccggtagctgctcatgctgtgacagcagcctatgctcctgcagctgctgct
acagcagccagacccgttcctgctgctgccgccgctgctgcagcagcagctgctgccaca
gcagcctatggagggtatcaaacagcacatactgcagcagattatggatacacgcagcgg
cagcaagaagcccctccaccacctccaccagtcacatcgcaaaattatcaggatacctat
acgtatgtacgttccacggcaccagctatagcctatgatagcaaacaatactaccaacaa
cctgctgctacagctcagccacaacagactgcagcagaagcctactatcaagctgctgcc
aaggcaggatatagtcaagctgcaacacaatatacacaagctcaacaaactcgacaagtc
acagcgattaagccagctacaccaaacccaactactacctttactgtttacccagtgtcc
acaacagtgcaaccggctgctgcagcagctgccactgtggttccgtcctatactcaaagt
ggtacatacagctcgactgctgtgacttatactggggctacgtatgctggatatgaagct
gcagtgtattctgccgcttcgtcttactatcaacaacagcagcagcagcaacagcaacaa
caaaaacaagcagcagcttgggctgggactactttcacaaagaaagtgccattccagaat
aaacagaaaccaaagcagccacctaaacaacctcagatccattactgtgatgtttgcaag
attagttgtgccgggccacagacatacagggaacatttggaaggacagaaacacaaaaag
aaggaagcggccctcaaaactactaatcaaagcagcaatactgggacagctcgtggcatt
caaaatcagctgcgttgtgaactctgtgatgtttcttgcactggagctgatgcttatgca
gctcatattcgtggagcaaagcatcagaaggtagtgaagttacataccaaacttggcaag
cccattccctcgacagagcctagcatggtgagccagacgacaaccacaactacagctgga
acttcaatcaagccaactcctctgagccaacccacaggatccagcagtggtatgactgct
gcaactgctactgtctctactgctgtaaagccaaatcaattggcggctgtctctgtcaat
aatgttgctaacaagctacttgctgcaaaaaaagcaccaacaccgaagatcacttttgtt
ggtggtaacaagctgcagactacaggaataaccaatatcattgacgaagtcaaaacacct
gaagttaaagtagcaacaccacctgttcaagagaccaaatctgaggcagtggtggaatcc
atgacaactcttgctgcattgcagagtgatgttcagcctgttggtcatgattatgtggaa
gaggttcgaaatgatgaaggcaaagtgattcgtttccactgtaagttgtgtgaatgcagt
ttcaatgaccctaatgcaaaggaaatgcacttgaaagggagaagacatcggctgcagtat
aagaaaaaggttaatcctgaattacaagttgaagtaaagcccagcatcagagcaagaaaa
atccaagaagaaaaaatgagaaagcaaatgcagaaggaagaatattggagacggagagaa
gaagaggagcgctggcgtatggaaatgaggcgctatgaagaggacatctactggaggaga
atggaagaggaacaccactactgggatgaccgtcgcagaatggctgatggatatccacca
ggtttacttggtgttcgaccaggaatgatgcaaccccaggggccactgcctcccagacgt
ccagactcatcggatgatcgctacgttatgacaaagcatgctgcaatctatccaaccgag
gaggagctgcaggccgtccagaagatagtatcgcatactgaacgcgctcttaaacttgtg
tccgactgcatcacggaacaagataaaccaaagaataaagaggatgagaagaaagatgca
attaaagatagaagagatgatagccagagagctttgaaaggtgtaatgcgagttggtgtg
cttgccaaagggttgctgttacgtggggacaaaaatgtgaaccttgtcctgctctgcgca
gagaaaccgactggaacactgctaaatcgcattgcagagaacttgccaaagcagcttgcg
gcaaccactcccgagaaatatgaagtgaagtgctgtgtacctgactcggccataattctt
acttcgtttgcggaaccgaaaatgcaagtcaccatcacacttacatccccggtcattaga
gaggagaacatgagggatggagatgtaacctcggttatggtgaaagatccaccggacgtc
ttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtggttccag
gctagagccaatggtttgcaatcttgtgtgattattattcgcatccttcgcgatctctgc
cagcgtgtaccaacctggggagcattgccaagctgggccatggagttgctggtggaaaag
gtaatcagcagtgcttctggaccacttagtcctggtgatgccatgaggagagtttttgaa
tgtgtctcttctggaatacttttaccaggtggtcctggactatacgatccttgtgaaaag
aaccctagtgatacactgaattcagtgattggacagcaacgggaagatatcacggctagt
gcacagtttgcattgagattagtagcattccgtcagattcacaaggtcctgggaatggat
ccattacctcagatgaatccacgtttcaatgtacgtaaccgaaagaggaggagggacaac
agtgatggcactgatggattggaagcagaaggaaagaaggataaaaaagattttgacagt
ggagaattttaa
DBGET
integrated database retrieval system
