Scyliorhinus canicula (smaller spotted catshark): 119962803
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Entry
119962803 CDS
T11175
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
scau
Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119962803
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119962803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
119962803
NCBI-ProteinID:
XP_038646827
LinkDB
All DBs
Position
1:complement(55194505..55505833)
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AA seq
2219 aa
AA seq
DB search
MTAANWVANGASLEDCHSNLFSLAELTGIKWRRYSFQGLGGCGPIISAPAQDDPILQTFI
RCLQANLLCVWRRDVRPEAKELWIYWWGEEPNLVDIIHHELRVVEDGLWENGLTYECRTL
LFKAIHNLLERCLMDKNFVRIGKWFVKPYEKNEKPVNKSEHLSCSFTFFLHGESNVCTSV
EIAQHQPVYLVNEEHINMALLSATPFQVIISPFGLNGTLTGQTYKMSDPATRKLIEEWQY
FYPMVLKKKETKEEEEMDCDDDFPVAVEVIVGGVRMVYPSAFVLIPQGDIPVIPNAANAG
GHTNPTQGPGSVKDTLSCGLPLTPPTSPEQTIIGDGIAQTVISHVSGQEGAVNASSPKHS
GKIPQKITNQMVQKVWKECNLNKTQLKRHSTSENSEEEVSSNAASWDFTEPGQRVNCSCS
RQKLLKQRSATGTNRPPSISQPGFNTGLPSASSLPSSASSKHKTNEKQEKGDKQQKRPMT
PFHHRPSLTDELCMEQDPTGQKLGLVGIDVSLDMHSSRKYGKPASGPPGNQSKPLNLNPM
DSPHSPISPLPPTLSPQPRGPEAEGLEGAPVPINPLLYSNGLELQAIPSLDDKTGLLSQR
LPPVPEVSETTLYNGITAQNLESSDKISWQCYKTPTHVEGEFRPPELHCDRCDNKIDNLD
GSALRRLLAQPHKRFKVSEERIQIHIQEINYLDPTRLMQQHGEGPGELNDPYTFVDGDIE
YSFTSIKKSKLGSEKDTAKKLQQNKLEDGFGTRDAPASHAAQLPDGKDAMSIFSTAPKSE
TRQSPTGRTVPASLTRETDLVVSLNDLDNLFDNSDDEENATSPTRSKQANVGSEDRAVGK
DVKTTGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVNSEMTAGMNSVENPVGGMT
ATQFAEFKMQVEDRLGSPKPEEITDFSYVHKPPKAKAFVGSSMFAPLKAVPSQCLAPLKM
PDACMYRPSWAIPPKIEQLPVPPSASLNRDGYVNVPSVGSLTEDYIQMSTPQMSTPLAVS
STAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSADLCSPAST
PSTTRPLNSVEPATIQSIPQAHSLYVTLILSDSVMNFFKDRNFDSCCICVCNMNIKGADV
GLYIPDPTNEAQFGCTCGFSAVVNRRLGYNAGLFLEDEFDIFGRTSEIGQAAERRLILCR
NSIVPQGFDESKRLQDLTSSLIFLVQDQCTGPFTSLSSLDYISLDRSALQSANWNYDKLR
ADSSDSCTECFNALEQGRQYVDNPSGGRIDEALIRSRSLHPWPNSNVLDVSILSSQDVVR
MLVSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKIGRGSYGSEESPEPLPIPTLL
LGYDKDFLMISPFALPFWEKLLLEPYGSQRDVAYIVVCPENEALLTGAKNFFRDLSAVYE
TCRLGEHRPICKVLRDGIMRVGKSSAKKLADESVDEWFSQAWVSDENDNLAKLKLYAQVC
RHHLAPYLATLQLDNSLLIPPKHQPTTSSVTQGQAATGSSGPSSGTGVTSAPVTTGTTAT
STTSTGSSTAATGSSGIGSGSTGTSSTSTTSTTTTTTTPVLHQTGTTASSSGFGGTVGAT
QSGNTGTSTERPPGCTPSGSGDSDTQSSVQQQEVQESTTERERIGIPTEAESADSNAYPP
AVVIYLVDPFTYSSEEESSFTSGWLLGLLRCYMEMLDNLPEHMRNAFTVQIVPCQYLLQP
VKDDHTFYIQHLKSLAFSVYTQCRRPLPTQIHIKSLTGFGPASTIDMTLKHSERPHPIQV
YSPPYILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCI
LNIDVPNRSRRSKVPARKIGLQKLWEWCVGIMQMTSLPWRIVMGRLGRVGHGELKDWSIL
IGRRSLQSTSKQLKETCTMCGISAADSPTILSACLVALEPQGSFVVMPDAVTMGSVFGRG
TALNLQTSQLNTPQDASCTHILVFPTSAATVVANTEALEVLGNPDGIGILEEDIFAEDFD
NDIRILITGNLHPSPTSSPVLSPGSPGTVASSHFQHSSEAGRGQGGERLLSTEAHEEVAN
VLQQPLALGYFVSTAKAENLPQWFWSACPNAQNQCPLFLKASLHHHVSLAQSDELLPGKH
SHPHPLDSNRTSDVLRFVLEQYNALSWLNCNPATQDRQSCLPVHFVVLTQMYNAIMNLL
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagcaaactgggtggccaacggtgctagcttggaggactgccattcgaattta
ttctctctggctgaactaactggcatcaaatggcgtaggtacagtttccagggtctaggg
ggctgtggtcccatcatctcagcaccagctcaggatgatcctattctgcagaccttcatt
agatgtctacaggccaatctgctatgcgtatggcgacgagatgtaagacccgaagccaag
gaattgtggatttactggtggggagaggagccgaatttagttgatataattcatcatgaa
ttacgagtggtagaggatggtctctgggaaaatggactcacatatgaatgcagaacactg
ctctttaaagccattcacaatttattagaaaggtgtctgatggataagaactttgtcagg
attggaaaatggtttgtcaaaccttatgaaaaaaatgagaagcctgtcaacaaaagtgag
cacctttcctgttccttcaccttctttctgcacggagagagcaatgtctgcacaagtgtt
gaaattgctcaacaccaacctgtgtaccttgtcaacgaagagcacatcaacatggcactc
ttgtcagccacacctttccaagtcatcattagtccatttggactgaatggcacgcttact
ggccagacatacaagatgtctgatccagctacaaggaaattaattgaagagtggcaatac
ttctatccaatggtattgaagaagaaagaaacaaaagaggaagaagagatggattgtgat
gatgacttccctgtagcagttgaggttattgtaggtggagtaagaatggtatacccgtca
gcttttgtgttgattcctcagggagatatccctgtaattccaaatgctgctaatgcagga
ggccatacaaatccaacacaaggaccaggaagtgtgaaagacaccttaagttgtggattg
ccactcacaccacccacttcacctgagcagaccataataggtgatgggattgcacagact
gtcatcagtcatgtgagtggacaagaaggagctgtaaatgcatcaagcccaaaacattct
ggtaaaattcctcagaaaataaccaaccagatggttcagaaagtctggaaagaatgcaat
ttgaacaaaacgcaactgaaaagacattcaactagtgaaaattctgaggaagaggtctcc
agcaatgctgcttcctgggattttacagagcctggccaaagagtgaattgttcttgttca
aggcaaaaacttctaaaacaacgaagtgcaacgggcacaaaccgccctccatccatctcc
cagcctggttttaatactgggctcccttccgcttcttccttgccatcgtctgcctcttct
aagcacaaaacaaatgagaagcaggaaaagggagataagcagcagaaacgacctatgact
ccatttcatcatcgaccctcattaactgatgagctttgcatggaacaagatcccaccggg
cagaagcttggattggttggtattgatgtctccttagacatgcacagcagccggaagtat
ggcaagccagcatctggacctccaggaaaccagagcaagccactaaatttgaatcctatg
gattctccacattctcccatctctcctcttccgccaactctcagccctcaaccaagaggt
ccagaggcagaaggtttggaaggagctcctgtgcccattaatccgttgctgtacagtaat
ggtctagaacttcaggcaatccccagccttgatgataagactggacttttatcacaaaga
ctaccgcccgtgccggaggtgagcgagacgactctatacaatggtatcactgcacaaaat
ttggagtcatcggacaaaatctcatggcagtgttacaagactccaacccatgtagaagga
gaattcaggccaccagaactgcactgtgacagatgtgacaacaaaattgataatctagat
ggttcagcactaagacgacttctagcacaaccccataaacgattcaaggtttcagaagaa
aggatacagatacacatccaggaaattaattacctggatccaactagacttatgcagcag
catggcgaaggccctggggaacttaatgacccttacacatttgtggatggtgatattgaa
tacagctttacatctattaaaaagtcaaaacttggatctgaaaaagatacagcaaagaaa
ttgcaacagaacaagcttgaagatggatttggtactagggacgctccagctagtcatgct
gcacagttgcctgatggaaaagatgccatgtctatttttagcactgctccgaaatcagaa
acacgacaatctccaacagggcgaacggttcctgccagcctcacacgagagactgaccta
gtggtatctttgaatgatctggacaatctttttgacaattccgatgatgaggaaaatgca
acttccccaacacggtctaagcaagcaaatgtaggatcagaagacagggctgttggaaaa
gatgtgaaaacaacagggccttatcctccaactgttgcagatctgcaaagaatgtttccg
acccctccatctctagagcaacatccagcattttctccagtaatgaactacaaagatggt
gttaattcagagatgactgcagggatgaacagtgtggagaatccagtgggaggcatgact
gcaactcagttcgcagaatttaaaatgcaggtggaagatcgactgggcagtcctaagcct
gaagaaataacagatttctcttatgtacacaaacccccaaaagccaaggcctttgttggg
tcttcaatgtttgcaccactaaaagcagtgcccagtcaatgccttgctccactgaaaatg
ccagatgcctgcatgtatagaccatcatgggctattcctccgaaaattgaacaactgcct
gtaccaccttctgcttcattaaatcgggatggatatgtcaatgtgcctagtgttgggagt
ctgacagaagattatattcagatgagtactcctcaaatgagcacacctttggcagtaagt
tcgactgcacctgccagcaacagtggtgctggtgtgttgccatctccagcaacccctcgc
ttttctgtcccaacacctcgtacaccaagaaccccacgaactccacgcggtggtggcact
gccagtgggcaaggatcagtgaaatatgatagtgctgatctgtgctctcctgcttcaaca
ccctcgacaacgcgaccattgaactcagtggagccagcaaccatacagtcaattccacaa
gcccacagcttgtacgttacgctaatcttgtcagattcggtgatgaatttcttcaaggat
cgcaactttgatagctgctgtatctgtgtttgtaatatgaatatcaaaggggcagatgtt
ggtttatacatcccagatccaaccaatgaagctcagtttggatgcacctgtggatttagc
gctgttgtaaaccgcagacttggatataatgcaggtctctttcttgaggatgaatttgat
atttttggaaggacctctgaaattggtcaagctgcagaaagacgattgatcttgtgtcgg
aattctatagttccccaaggttttgatgagtcaaagaggctacaggacctaacatcaagc
ttaatatttcttgtacaggaccaatgtacaggaccgttcacttctctaagttctctggac
tacatttccttagatagatcagcacttcaatcagcaaactggaactacgacaagctgaga
gcagatagtagtgattcttgcacagagtgtttcaatgccctggaacagggtcgacaatat
gtggataatccttctggtggaagaatagatgaagcactaattaggagcaggagtttacac
ccatggcccaatagtaatgttctggatgtaagcatcctatcatcccaggatgtggtccgt
atgctggtatcactgcagccttttctacaagatgccattcagaagaaacggacaggaagg
acgtgggagaatatccaacatgtgcaaggacctctcacctggcaacagttccacaagata
ggcagaggatcctatggttcagaagaatcaccagagccacttcctattcccacactgctt
ctgggctacgataaagacttcctgatgatctctccttttgcactgcccttttgggagaag
ctgcttcttgaaccatacggttctcagcgtgacgtagcctacattgtggtctgtccagaa
aatgaggccttgctcactggagccaaaaatttcttcagggatcttagcgctgtatatgag
acatgcagacttggtgagcatagacctatctgcaaagtattgagagatggaattatgcgg
gttggtaagagttctgcaaaaaagctggcagacgaatctgttgatgagtggttctctcaa
gcctgggttagtgatgagaacgacaaccttgccaagttaaaactctatgctcaagtctgt
cgccatcacttggcaccttacctggctacacttcagctggacaacagcctgctaattcca
cctaagcaccaaccaacaacatcttctgttacccaggggcaggcagcaacaggaagcagt
ggaccgtcatcgggcacaggggttacttctgcgccagtgacaactggcactacagctact
tccacaaccagcactggcagtagtactgcagcaactggcagctctggtataggaagtggg
tcaacaggtaccagctccacttcgactacctccactactaccacaaccactactccagtt
ctgcatcagacagggacaaccgcatcctcttcaggatttggtgggactgttggagctact
cagagtggtaacacaggtaccagtacggagagacctccagggtgtacacctagtggaagt
ggagattcagatacccagagttctgtacagcagcaagaagtacaagagagtactacagaa
agggaacggataggaattccaactgaagctgaatcagctgacagcaatgcatatccacca
gctgtcgtcatctatcttgttgatccttttacatattcctctgaagaagagtcatctttt
actagtggatggctgctaggcctgttacggtgctacatggagatgctggataatctacca
gagcatatgaggaatgcattcactgtccagattgtgccttgccagtatctactacaacca
gtgaaagatgatcacactttctatatccagcacttaaaatcactggcattctcagtttac
actcaatgcagacggccgcttcccacacagatccacattaaatcactaactggctttggt
cctgcttccacaatagatatgacccttaagcattcagagcgtccccatcctatccaggtg
tattcacctccctatatcttggcaccaattaaggataaacaaacagagctaggtgaaaca
tttggagaggcaagccagaagtacaatgtgctctttgttggttattgtttatcgcatgat
cagaggtggctactggcatcctgtacggacctccatggggaattactggagacatgcatt
ctgaatattgatgtaccaaacaggtcgaggagaagtaaagtgcctgcccgtaaaatcggc
ttgcagaaactatgggaatggtgtgttggaattatgcaaatgacgtcactgccatggaga
attgtaatgggaagactggggagagtaggtcatggagaactcaaagattggagcattctt
attgggcgacgctcgctacaatctaccagtaaacaattaaaggaaacctgcacaatgtgt
ggtatatctgcagcagactctcccacaattctcagtgcctgcttggttgccctagaacca
cagggttcatttgttgtcatgcctgatgctgtcacaatgggttctgtgtttgggcgtggt
acagctctcaacttgcaaacatctcagctgaataccccacaagatgcgtcctgtacgcac
attctggtttttccaacatctgctgctacagttgtcgccaatactgaagctctggaagtt
cttggtaacccagatggtataggaattctggaggaggatatttttgctgaagactttgac
aatgatattcggattctgataactggtaatctccacccatctcccacctcttctcctgta
ctgtctcctggttcacctggcacagtggcaagctcacattttcagcacagcagtgaagct
ggcagggggcaaggaggtgagcggctcctctccacagaagctcatgaggaagtggcaaat
gtattgcagcaaccacttgctcttggatattttgtttcaactgccaaagctgagaatctt
cctcagtggttttggtctgcctgccccaatgcccaaaatcagtgcccattgtttctaaag
gcctctttacatcaccatgtctccctggcacaatcagatgagctacttcctggcaagcac
tctcatcctcaccctctggattccaacagaacttcagatgttttgaggttcgtactggaa
cagtataatgccttatcatggctcaactgtaaccctgccacacaagatcgccagtcctgt
ctgcccgtccactttgtggtgcttactcaaatgtacaatgccattatgaatttactttga
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