Scyliorhinus canicula (smaller spotted catshark): 119962937
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Entry
119962937 CDS
T11175
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119962937 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119962937 (cnga1b)
Ion channels [BR:
scau04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119962937 (cnga1b)
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
119962937
NCBI-ProteinID:
XP_038647172
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Position
3:124422534..124521657
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AA seq
679 aa
AA seq
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MAALINTHQSYLRIPRGAIHPAEDEIEQMENGERRNQTLADDMQIYNINNSNNNDDEKEK
NKEKKSKKEKKGKSDGKKGEKKKDKDKKKDKDKNKEKAGEKDKDEKKDEKNDEKKDEKKD
EKKDDIKDDVKEILEKFEKMIPILDPAGNLYYNWLLIITMPVMYNWTMVIARACFEELQL
DYLSTWFILDYVSDFIYIMDMYLRTKTGYLEQGLLVSDIKKLRERYFSTIQFKLDLVSLI
PTDFLFFLVGLKYPEIRLNRLTRISRMFEFFSRTETRTNYPNIFRISNLVMYIVIIIHWN
ACMYFSISKAIGFGADTWVYPDVNIPEFAQLSRKYVYSLYWSTLTLTTIGETPPPVTDPE
YFFVVADFLVGVLIFATIVGNVGSMISNMNAARAEFQSRIDAIKQYMHFRKVSKELEKRV
IKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLK
LRPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKG
SRAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGKQILMKDGLLDLEIA
QLGADPKDMEEKITRLDMAIDLLQTKFARLLAEYNSTQQKLKERVTRIENKIKRSGITFE
YSELTDIEAAAVAEESKKE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctgattaatacacaccagagctacctacgcattccccgaggggctatccat
cctgcagaagatgagatagagcagatggagaatggagaaaggaggaaccagacccttgct
gatgacatgcagatatataacattaacaacagcaataacaatgatgacgagaaagaaaaa
aataaagaaaaaaagagcaaaaaagaaaaaaagggtaaatctgatggcaaaaaaggagaa
aagaaaaaggataaagataagaaaaaagataaagacaagaataaagaaaaggcaggagaa
aaagataaggatgagaagaaagatgaaaaaaacgacgagaagaaagatgagaagaaagat
gagaagaaagatgacatcaaagatgatgtaaaggaaattttggaaaagttcgagaagatg
attcccattcttgacccagcagggaacttgtactacaactggctcctgataattacaatg
cctgtaatgtacaactggacaatggtcatagctagagcatgttttgaggaacttcagtta
gattatttgagcacatggttcatccttgattatgtatcagattttatttacataatggac
atgtatttaaggacaaaaacaggttatttggaacaaggtctgttagtcagtgacattaag
aaactcagagagagatacttttccacaatccaattcaaattggatctcgtgtcgctcata
ccgactgactttcttttctttctcgtgggactaaaatacccagaaattagattaaatcgt
ttgactaggattagtcgaatgtttgagttcttttcaagaaccgaaactcggacaaactat
ccaaacatcttcaggatttccaaccttgtcatgtacatcgtgatcattatccattggaat
gcatgtatgtacttttcaatttccaaagctatagggtttggggcagacacatgggtatat
ccagatgtaaatattccagaatttgcccagctttcccggaagtatgtgtacagtctctac
tggtcaacactgacactcaccaccattggagaaacgcctcctccagtcacagatccggaa
tacttctttgtcgtggccgatttcctggttggagtgttgatttttgccaccattgttggt
aacgtcggttccatgatttctaacatgaatgcagctcgtgcagagtttcagtcaaggatc
gatgccatcaaacaatacatgcacttccgaaaagtgagcaaagaattggagaaaagagtt
atcaaatggtttgactacttgtggacaaacaaaaaggctgtagatgaaagagaggtcttg
aagtatcttccagacaagttaagagcagagattgccatcaatgtccatctcgatacgctg
aagaaagttcgtatctttgcagattgcgaagctggcctgctagttgagttggtgttgaaa
ctaaggccccaggtgtacagccctggagattatatctgccgcaaaggagacattggtaga
gaaatgtacataatcaaagaagggaaacttgctgttgttgctgacgatggaatcactcag
ttcgtggttctaagtgatggcagctactttggtgaaattagtattctgaatatcaaaggt
agtagagctggaaatcgaagaacggcaaacattaagagcataggctactcagacttgttc
tgcctctccaaagatgatctaatggaagccctcaccgagtacccagatgcaaaagcaatg
ctggaagaaaagggaaaacaaattctaatgaaggatggccttctggatctagagattgcc
cagcttggggctgacccaaaggacatggaagagaaaataacgagactggacatggcaatt
gaccttttacagactaaatttgctcgacttctggcagaatacaattctacacaacagaaa
ttaaaagaaagagtgacaaggattgagaacaaaattaaacgatcagggataacgtttgaa
tattcagaactgacagatattgaagcagcagctgtagctgaagaaagtaaaaaagaataa
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