Scyliorhinus canicula (smaller spotted catshark): 119962945
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Entry
119962945 CDS
T11175
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119962945 (gabrb1)
04082 Neuroactive ligand signaling
119962945 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119962945 (gabrb1)
Ion channels [BR:
scau04040
]
Ligand-gated channels
GABA-A
119962945 (gabrb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119962945
NCBI-ProteinID:
XP_038647206
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Position
3:complement(125691119..126125864)
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AA seq
476 aa
AA seq
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MWRVQDRGCFAAVSIPVMMAMVCYAQRVNESTNMSHVKDTVDNLLKGYDIRLRPDFGGLP
VDVGMNIDISSIDMVSEVNMDYTLTMYFQQTWRDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYSLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIDFQWTGGNYAVTGVEKIELPQFSIVEYKLVSKRAVFATGSYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPQLQKKATEKSTQPHLKSRLGTNKT
QVDAHGNILLTTLEIRNEVRASEVLTNINDPRTTMFSYDGASIQYRRSATSRGGYGRSTI
ERNMVQKKGRLRRRTSQLKIKIPNLADVNAIDKWSRVVFPVTFGFFNLVYWLYYVH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtggagagttcaagacagagggtgcttcgcggccgtgtcgatccccgtgatgatggct
atggtttgttacgcacagagagttaatgagtccaccaacatgtcacatgtgaaagacacc
gtggataacttgctgaaaggatatgacattcgtttaagaccagatttcggaggtctccct
gtggacgttggtatgaacatagatatttccagcatagacatggtctctgaagtcaatatg
gattatactctgacaatgtacttccagcaaacctggagagacaaaagactatcttactct
ggaatacctctgaacctcactctagacaacagggtggctgaccaactctgggttcctgac
acgtattttattaatgacaagaagtcatttgtacacggagttacagtgaaaaatcgaatg
attcgcctgcatccggatggcacggtcctctatagcttgagaatcacaaccacagcagca
tgcatgatggacctgaggaggtatcctttggatgaacagaactgcacacttgaaatagaa
agctatgggtacacaacagatgacattgactttcaatggacaggtggtaactatgcagtc
acaggagtagagaagattgagctgccacagttttctattgttgagtacaagctggtttca
aagagagcagtttttgcaacaggttcttatccaagactatcactgagttttcgactgaaa
agaaatattggctatttcatcttgcaaacatacatgccctcaactttaattacaatattg
tcgtgggtatccttctggatcaattatgatgcttctgccgcaagagttgcactaggaatc
acaacggtacttaccatgacaactatcagcactcacctcagggaaacccttcccaagatc
ccctatgttaaggccattgacatttacttgatgggttgttttgtatttgtattcctggct
ttattggagtatgcctttgtcaactatatattctttggaagaggaccacagcttcagaag
aaagcaacagagaaatccacacagccccacctgaaaagcagattgggaaccaacaaaact
caggtggacgctcatggaaatattctcctcacaactcttgaaattcggaatgaagtgaga
gcttccgaggtgctgacgaatatcaatgatccaagaacgaccatgttttcttatgatggt
gccagcatccagtacagaaggtcagccacaagcaggggtggctatggtagaagcacaata
gaaaggaacatggttcagaagaagggacggttgcggcgacgaacatcacaactgaaaatt
aaaatcccaaatttggctgatgtgaatgccatagacaaatggtcacgggtggtctttcct
gtaacatttgggttttttaacttggtttactggctctattatgtacactag
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