Scyliorhinus canicula (smaller spotted catshark): 119962968
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Entry
119962968 CDS
T11175
Symbol
si:dkey-1k23.3
Name
(RefSeq) heat shock protein beta-1
KO
K04455
heat shock protein beta-1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04370
VEGF signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119962968 (si:dkey-1k23.3)
04370 VEGF signaling pathway
119962968 (si:dkey-1k23.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119962968 (si:dkey-1k23.3)
03110 Chaperones and folding catalysts [BR:
scau03110
]
119962968 (si:dkey-1k23.3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119962968 (si:dkey-1k23.3)
Spliceosome [BR:
scau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119962968 (si:dkey-1k23.3)
Complex C
U4/U6.U5 tri-SnRNP related factors
119962968 (si:dkey-1k23.3)
Chaperones and folding catalysts [BR:
scau03110
]
Heat shock proteins
HSP20
119962968 (si:dkey-1k23.3)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119962968 (si:dkey-1k23.3)
Exosomal proteins of breast cancer cells
119962968 (si:dkey-1k23.3)
Exosomal proteins of bladder cancer cells
119962968 (si:dkey-1k23.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP20
Crystallin
Motif
Other DBs
NCBI-GeneID:
119962968
NCBI-ProteinID:
XP_038647295
LinkDB
All DBs
Position
1:complement(60466368..60488560)
Genome browser
AA seq
260 aa
AA seq
DB search
MSFSYPFVRRRCNPFRSCYVPSHLLDQDFGLPPLSEEPLRDWMEWVENQLNTSSPGRSRS
NPADSAAPSHCLPSLQQQLSGGMSLIQQTVGNWKISLDVKHFTPEELQVKIQEGYLEISG
SHKERQDQHGFISRNFTRKYKFPPDVDTLLVTSSLTPDGILIVEAPLPNPAVQVPVEIMV
PVQKEVKSEEVDTEKDKEIEKGVEQEKEPEMEHEKEPEEDQEVPREQDKDKETQQEREPE
KEEAEQEKVVQQEEEKEVTQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcgtatccctttgtccgaagacgctgcaatcccttcaggagctgttacgtc
cccagccacctgctggatcaggattttgggctgccccctctgtctgaagagccactgagg
gactggatggagtgggtggagaaccagctcaacaccagctctcccgggaggtcacgttca
aacccggctgacagtgcagcacccagtcactgcctgccaagcctgcagcagcaactcagt
gggggaatgtccctgatccagcagaccgtgggcaattggaaaatcagcctcgacgtgaag
cacttcacccctgaagaactccaggtgaagatccaggagggctacttggagatttcagga
agccataaagaaagacaagatcaacatgggtttatttctagaaattttactagaaaatac
aagtttccaccagatgtggacaccctgttggtgacctcgtccttaacccctgatgggatt
ctaattgtggaagctccactccccaatcctgctgtccaggttcctgtagaaataatggtt
cctgttcaaaaagaggtgaagtctgaagaagtggacacagagaaggacaaagagatagag
aagggggtagagcaagagaaggagccagagatggagcacgagaaggagccagaggaagac
caggaggtcccaagggagcaggacaaagataaggaaacacagcaagagagagagccagag
aaagaggaagcagagcaagagaaagtggtacagcaagaggaagagaaggaagtaacccaa
tga
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