Scyliorhinus canicula (smaller spotted catshark): 119962985
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Entry
119962985 CDS
T11175
Symbol
xbp1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119962985 (xbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119962985 (xbp1)
04131 Membrane trafficking [BR:
scau04131
]
119962985 (xbp1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
119962985 (xbp1)
Membrane trafficking [BR:
scau04131
]
Autophagy
ER-phagy
ER stress-related proteins
119962985 (xbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
KASH_CCD
GAS
YabA
DUF2205
Motif
Other DBs
NCBI-GeneID:
119962985
NCBI-ProteinID:
XP_038647339
LinkDB
All DBs
Position
1:complement(60764945..60773407)
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AA seq
380 aa
AA seq
DB search
MVAMNTAGSAKVLLIPGGKQQNGLEVSRHISVVYPPQNDSPSAPAAAGHGHRKRQRLTHL
SPEEKAMRRKLKNRVAAQTARDRKKARMSELEEQVLEMESENQKLQIENRLLHEKTHSLM
SENRELRQRLGMEVLDAEKEKILLQARVDEISLAAGSAESAALRLRVPLQQVQAQMCASL
TTSTWILTAITLQTLSLISSWAFWTTLTQKPCSDSVKRNRSFANLGDCAYNEDNGSLPSS
NSAPLGAPSTKLEAINELIHFDHFYHKPLAEASLVQSSETAIKIEQASFSGTDEGIAEAP
LQVELKQEPLEDEFITELGLTNILSSRQNQEKPTCPTDSSSDSDYEGSPSPLSDMSSPLT
LDNSWEDTFTSELFPQLIAV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgatgaacactgcgggctcggccaaggtactgctgatcccgggagggaagcag
cagaacggcctggaggtcagccgtcacatctcggtggtgtacccgccccagaacgattcg
ccctcggctccggcagcagccggccacgggcacaggaaaaggcagcggctcactcacctc
agccccgaggagaaggcaatgcggaggaagctgaagaaccgagtggcggcacagacagcc
cgagacaggaaaaaagctcgcatgtctgaacttgaagagcaagtattggagatggaatcc
gagaatcagaaactacagatagaaaaccgactcctacatgagaagacacacagcctgatg
tctgagaacagggaactcagacagaggctaggcatggaagtgttggatgctgaaaaagag
aagatacttctccaggccagagtggatgaaatcagcctggcagctgggtccgctgagtcc
gcagcactcagactacgtgtgcctctgcagcaggtgcaggcccagatgtgtgccagcctg
acgacttccacatggattctgacagcaataactcttcagactctgagtctgatctcttcc
tgggctttctggactactttgacccagaagccttgctccgattcagtgaagaggaatcga
tcctttgctaacctgggggattgcgcctacaatgaagacaatggttccctaccatcctcc
aactctgcccctctgggggccccatcaacaaagctggaagccattaatgaactgatccac
tttgaccacttctaccacaagcctctcgctgaggccagcttagtacagagcagcgaaact
gccatcaaaattgagcaagcatctttcagtggcacggatgaaggaatagctgaagcccct
ttacaagtggagctcaaacaggaacccttggaagacgagttcatcactgaactgggactt
acaaacattctttcatccaggcaaaatcaggaaaagcccacctgtcctacagattcctcc
agtgactctgattatgaaggatccccatctcctctcagtgatatgtcctccccactaact
ctggataacagctgggaggacactttcacaagtgaacttttcccccaattaatagcagtg
taa
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