Scyliorhinus canicula (smaller spotted catshark): 119963057
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Entry
119963057 CDS
T11175
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119963057
04090 CD molecules [BR:
scau04090
]
119963057
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119963057
CD molecules [BR:
scau04090
]
Proteins
119963057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Claudin_2
CENP-F_leu_zip
Tweety
HVSL
OmpH
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
119963057
NCBI-ProteinID:
XP_038647510
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Position
3:159105009..159413020
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AA seq
899 aa
AA seq
DB search
MAITATMLILMLCSRTGSESQPRSYPIETETLRFGAVPAVEYETNINYDPGTIGFLFQMA
RTFLHVVQPNRFPREMIIEIIKQNYEDFLHKYQEPENVVLTLQIIYYEIGFVICAALGIV
FILLMPVLGLCFCMCRCCDNCGGELHQRQKKNTDCRRSCFATTLFIITVIITAGTLCVFA
ANQNLTNKIKGIKKLVNHNFQDLHALLDYAPTQLNYISQKYGIAKEKAYSDINNIGSILG
GKVNARFEKDVIPALEGSFKMARVTLERAIKAIEETKEALENLSTSRQTLDKATTKLQEN
LSDVRSSLNNTLNDAACRASNAVAYCDGIRDSLDSLNINASFSQLQGVDSELANVNDVLK
TDFEDSIQKGHSAFNEIPAMLENETKSFSSDAKIELHEIGEKISTLTQEGAIDDFIHTST
VYLNLAQQYFLQYFPYLEKYDFYRWLASVALCCAVILILTFNYLGLLCGLCGFDEHASPT
TRGCVSNTGGNLLLAGVGISFIFSWLLMLVVLATFIAGGNVEKLACQSIKDNNLFKVLDT
PYLLNSQWKHFLSGLLLSEHNLNITFQSVYSKCHKNKGLYSAFQLHHLLEDHVNLSEPGT
YLTDKFANIHVNLSNIVILDEEAKEGLRNFTNTGIDQINFTAYIIELKKSVTMVNLHTFA
NDLEAKANALPAGALANALRGHTNSVREIYKQQVITLEQTALCKFSLGWMTIAEIVQKYV
DARNVLNESIGKLQNTAANLKIKVGRVIHAVESAQNLINNNSSDIVKQEIQKYSETLSSY
ITDYLEWGIDSMNNAVAVCKPIANAVDAADVILCGFIVDSLNGFWFGLGCCTVFLIPSII
IAVKLAKFYRRMDTEDVYDDVQNIPMKTKWKSLILLSTPSNDTLTRFPRASAPPKLPGW
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggctattacagcaacaatgcttatattaatgctttgtagtaggactggaagtgaaagc
cagccacggagctacccaatagaaactgaaacattgaggtttggggcagtacctgctgtg
gagtatgagactaatataaattatgatcctggaactataggattcttatttcaaatggca
cgcacatttctacatgtagtacaaccaaatcgttttcctcgcgagatgatcattgagata
ataaagcaaaactatgaagactttctacacaaatatcaagagccagaaaatgttgttctg
actctccagataatatactacgagattggtttcgtcatctgtgcagcgctgggaattgtg
tttattcttctcatgccagttttgggcctgtgtttctgcatgtgtcgttgctgtgacaac
tgtggaggggagctgcatcaacgacagaaaaaaaatactgattgtagaagaagctgcttt
gcaacaaccctgtttattattaccgtaattataacggccggaacattatgtgtgtttgcc
gcgaaccaaaacctcaccaacaaaattaaaggaattaagaaactggtcaaccacaacttc
caagacctacatgctttgctcgattacgcaccaactcaactaaattacatctcacagaaa
tatggcattgctaaggagaaagcatactctgatattaacaatattgggagcattcttggt
ggcaaagttaacgcacgctttgaaaaagatgtaatccctgcactggagggttcattcaaa
atggccagagtcacattggaaagggctatcaaagccatcgaagaaaccaaagaagcttta
gagaacttgtctacctcacgtcaaactttagacaaagcaactaccaaacttcaggaaaac
ttgtctgatgtacgatcaagtctaaacaacacattgaatgatgcagcttgcagagcatct
aatgctgttgcatattgtgatggcataagggattcactggattctctcaatataaatgcc
agctttagtcagctacaaggtgttgattctgaactcgcaaatgtgaatgatgtgctgaaa
actgactttgaagactcaattcagaagggacattcagcatttaatgaaattccagcaatg
cttgaaaatgaaaccaaatcattttcatcagatgcaaagattgagctccatgaaattgga
gagaaaatttcaactttgactcaggagggggctattgatgatttcatccatacttccact
gtgtatcttaatctggcccagcaatactttcttcagtattttccatatctggaaaagtat
gatttttacagatggctggctagtgttgcactctgctgtgctgtaatacttatccttaca
ttcaattatcttggtttgctttgtggattatgtggctttgacgagcatgcttctccaacc
acacgaggctgtgtatcaaacacggggggcaaccttcttttagctggagttgggatcagc
ttcatcttctcctggcttttgatgctggtagttttggccaccttcattgcaggtggaaat
gtagaaaaactcgcttgtcagtctataaaagacaacaatttatttaaggttctggatacg
ccttatttgttgaactcgcagtggaaacactttctttctggacttctgctttctgaacac
aacttaaatatcactttccagagtgtatacagcaaatgccacaaaaataaaggactatat
tcggctttccagctacaccatttattagaagatcatgtaaatctcagtgaacctggtact
tacctgactgacaaattcgcaaacattcatgtgaatttaagtaacatagtaatattggat
gaggaggcaaaagagggtcttcgtaacttcacgaacactggcattgaccaaattaatttc
actgcctacatcattgagctcaagaaaagtgtgactatggtcaatcttcacacatttgca
aatgatctagaggcaaaagcaaatgcattgcctgcaggagccctagcgaatgcattaaga
ggccatacaaacagtgtccgggaaatctacaagcagcaagttataacactagaacaaact
gcgctttgcaagttttcactgggctggatgacaattgctgaaattgtccagaaatatgtt
gatgctcggaacgtattaaatgaaagtattggaaaactacaaaacacagcggcaaactta
aagataaaagtgggacgtgtaattcatgctgttgaatctgctcaaaacctaatcaacaat
aatagcagcgatattgtcaaacaggaaattcaaaaatacagtgagactttatcaagctac
atcactgactatttagaatggggcatagattctatgaacaatgcggttgctgtttgtaag
ccgattgctaatgcagtggatgcagctgatgtgattctatgcggttttatagtggattcc
ctgaatggtttttggtttggccttggttgctgtacagtatttttaataccaagtattata
attgctgtgaaattagccaaattctatcgtcggatggatacagaggatgtatatgatgat
gttcagaatattcccatgaaaactaaatggaaaagtttaattttactaagcactccttca
aatgatactttgaccagattccccagagcttcagctcctccaaagctccctggttggtga
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