Scyliorhinus canicula (smaller spotted catshark): 119963092
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Entry
119963092 CDS
T11175
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119963092 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119963092 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scau02044
]
119963092 (sec31a)
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119963092 (sec31a)
Secretion system [BR:
scau02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
119963092 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Prp18
Motif
Other DBs
NCBI-GeneID:
119963092
NCBI-ProteinID:
XP_038647601
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All DBs
Position
3:complement(167076273..167209799)
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AA seq
1265 aa
AA seq
DB search
MKLKEINRTAIQAWSPARQHPIYLAAGTSAQQLDATFSTSASLEIFELDLADSTLDMKSC
GTFSSPHRYHKLIWGAHEITTDGLSSGVLVAGGENGSIILYNPSEIIAGGEDVVIAQKDT
HSGPVRALDFNPFQSNLVASGANESEIYIWDLNNFDTPMTPGAKSQPPEDISCVAWNRQV
QHILASANPSGRAVVWDLRKNEPILKVSDHTNRMHCSGLAWHPDVATQMAVSSEDDRMPV
IQMWDLRFATSPLRVLENHTRGILAIAWSLADSELLLSCGKDNRMLCWNPNTAEVVYELP
TATQWCFDIQWCPRNPAVLSAAAFDGHISIYSLMGGNLDAQRQRQVDNISSSFGNLDPFG
TGQTLPPLQLPQSVAQPSVVLPLKKPPKWIRRPVGATFAFGGKLVTFQNVKPQSQQQEVP
FQVFVSQVVTESELLNRSNELQSTIHTGGFVEYCQSKVNAAQTDFERNVWGFLKVNFEID
HRNKYLELLGYKHEELAEKIATALQSGADKIGLPADQAPGDFVQTAESAEDSPAIEDQLL
GETESESEEDEGDLDLSESTPEKQIEDETKFNLSVSGDVDGLITQALLTGNFEGAVDLCL
YDNRMADAIILAIAGGQELLAKTQKKYFAKTKSKITRLIDAVVTRDWKEILQSCDLQNWK
EALAALLTYARTDEFAAFCDFLGTRLESEGDSSLQAQACLCYICAGNVEKLVSCWDRAQN
GNSPLALQDLIEKVVVLRKAIELSQGTNNNGTGDVLAEKMSQYAGLLAAQGSLTAALSYL
PTDTNQLTILQLRDRLFRAQGEQVAGQELTSFPHGKHQVPRGRANSNHSHIPGQLQQQAP
TQQYYAQVRPAPTVTSWSNQTSTALPSFPSASASNTQGEAPPPGFVLQGIPNPSGQAQSP
TSTSTVYNMYTQVGSRQPFPQTYQPQQFPHGAGGPTYYQPHQPTAPPPPSSYPSVYLPSV
PSHSLPPSVAAPYPGQLQTSTTSSGSASAFLPHSGASYQHGGPGAPTSSVGYPPSTGSTG
DTYSLEETTCLEGPQNGWNDPPALSRMPKKKIMVPGNFTPPAPITAPIMNPVADPPAPTQ
HQQPPPSLQSSFQTPQQLPTQPGGQSPYQGILQPGMQPTLQTMMPKHSTEEAPGAPTGDI
MQPVQPVTTEKIAKKPIPEEHAILKIIFEGLIQRCMTAATDPQTKRKLDDANKRLESLYD
KLRDQVLSPAIVGGLHNIARSIETRNYSEGLNFHTHIVSTSNFSEISAFMPVLKVVLTQA
NKLGV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaaggaaatcaatcggactgctatccaagcatggagtccagcacgccaacac
cctatttacctggctgcaggcacctcagcacagcagttggatgctaccttcagcacaagt
gcttccttggagatctttgagctggacctggctgactctacactggatatgaaatcatgt
ggcaccttttcttccccacataggtaccataagcttatttggggtgctcatgaaatcacg
actgatggtctatcgtctggtgtcctcgttgctggtggtgaaaatgggagtatcattcta
tacaatccgtctgaaattatagcaggaggagaggatgttgtgattgcccagaaggacact
cactctggtccagttagagcacttgatttcaatccttttcaaagtaaccttgtagcttca
ggagccaatgagtctgaaatctacatctgggacttgaataattttgatacgccaatgaca
cctggagcaaaatctcagcctcctgaagacattagttgtgttgcctggaacaggcaagtg
cagcatattctggcttcagctaatccaagtgggcgtgctgttgtctgggacctgcgcaag
aatgaaccaatactgaaagtcagtgaccacaccaaccgaatgcactgttctggactggcc
tggcatcctgatgttgccacacagatggctgtttcctccgaggatgatcgaatgcctgtg
attcagatgtgggacctccggtttgcaacatctcccttgcgagtgctggaaaaccacaca
agaggaattttagccattgcctggagcctggcagactcggagctacttctgagttgtggg
aaggacaatcgcatgctttgctggaaccccaacactgcagaagtggtttatgagctgcct
acagccacacaatggtgctttgatattcagtggtgcccacggaaccctgctgtcctctct
gcagctgcattcgatggccacatcagcatctactccctcatgggtgggaatcttgatgca
caaagacagcgacaggttgacaatatttcatcctcctttgggaatttagatccattcggt
actggacagacccttcctccgttgcagctccctcagtctgtagcacaaccaagtgttgtg
ctgcctcttaaaaaaccacccaagtggattcgccgccctgttggagctacatttgctttt
ggaggaaagcttgtcacgtttcagaacgtgaaaccccaatctcaacagcaggaagttccg
ttccaagtattcgtcagtcaagttgtcacagaatcggaactcctgaaccgttccaatgag
ctgcagtcaacgatacatacaggaggctttgtggagtactgtcaatcaaaagttaatgct
gcccagacagactttgagaggaacgtttgggggttcttaaaggttaactttgagatagat
catcgcaataaatacttggaacttttaggatacaagcacgaagagcttgcagagaagatt
gcaacagcactacaaagtggagcagacaagattggacttcccgcagatcaggctcctggt
gactttgtgcaaacagcagaaagtgctgaagacagccctgctatagaagatcagttgctg
ggggagacagaaagtgagagcgaagaagatgaaggcgatttggacctcagtgagtccaca
cccgagaagcaaattgaggatgaaaccaaattcaatctttctgtcagtggagatgttgat
ggcctgattactcaagctttgctgactggcaacttcgaaggagccgttgatctctgcttg
tacgataatcgaatggcagatgccatcatattagcaatagctggaggacaggaacttcta
gctaagacacaaaaaaaatactttgccaaaacaaaaagcaagatcaccaggttgatagat
gctgtagttacaagagactggaaagagattctgcagtcatgcgatcttcagaactggaag
gaagctttggctgccttgttgacgtacgccaggactgatgaatttgctgcattttgtgat
tttttgggcacacggttagagagtgagggggatagcagccttcaagcccaagcctgcctg
tgctatatctgtgctggtaatgtggaaaaactagtatcctgttgggatagagctcagaat
ggaaactcacctcttgctcttcaggatctgattgagaaagtagtggttttgcgtaaagcc
attgaacttagccaaggaacaaacaataatggaacgggtgatgtcctagcagaaaagatg
agtcaatatgctggtctgttagctgcacaaggaagtctgactgctgctttgtcttatctt
cctactgataccaatcagttgacgatcctgcagttgcgagacagactgttccgtgcccaa
ggtgagcaggtagctgggcaggaattgacttcttttccacatggaaagcatcaagttcca
agaggtcgagccaactccaaccattcacacatcccagggcagttgcagcaacaagcaccg
acccagcaatactatgcacaggttagacctgcccctactgttacatcatggagtaaccaa
acttccactgcccttcccagcttcccttcagcatcagcatccaacactcagggtgaagcc
ccaccaccaggtttcgtactgcagggcattccaaatccaagtggacaggctcagtcacct
acttcgacgtcaactgtttataatatgtatacccaagtggggtcccgtcagccattccct
caaacttaccaaccacaacagttcccccatggagcagggggaccaacttattatcaacct
catcaacctactgcacctccacccccatcttcctacccatctgtatatttgccttctgtt
ccctctcactctttgcctccttccgtggctgctccgtatccaggacagctacaaacatct
actacatcatctggctctgcttctgcttttcttcctcactctggagcatcctaccagcat
ggcggacctggagctccaacgtcttctgtaggctatccaccatcaactggatcaacagga
gacacatattctctggaagaaactacttgcttagaaggacctcaaaatggttggaatgac
cctccagctctcagtaggatgccaaagaaaaagatcatggtaccaggcaactttactcct
cctgcacccatcacagctcccataatgaacccagtcgcagaccctccggctccaacgcag
catcagcaacctcccccttctctgcagagttcgttccagactcctcagcaacttccaact
caaccaggaggtcaaagtccctatcagggaatattgcagcctgggatgcagcccacacta
caaacaatgatgccaaaacatagcacggaggaagctcctggtgcacctactggtgatatt
atgcagccagtacaaccagtaaccactgagaaaattgccaagaaacccattccagaagag
catgccattctgaagatcatatttgaaggattgattcagcgatgcatgaccgcagccact
gatcctcaaaccaagagaaagctggatgatgcaaacaagcgactggaatctctgtatgat
aagctacgggaccaggtgctatcaccagccatagttggcggtttacacaacatagcaagg
agcattgaaactcggaactacagtgagggattaaacttccacacgcacatagtgagcacc
agtaacttcagtgaaatctctgcatttatgccggtcctgaaagtggttctcacccaggct
aataaactaggtgtttga
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