Scyliorhinus canicula (smaller spotted catshark): 119963169
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Entry
119963169 CDS
T11175
Name
(RefSeq) serine/arginine-rich splicing factor 9-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119963169
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119963169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119963169
Spliceosome [BR:
scau03041
]
Common components
Common spliceosomal components
SR proteins
119963169
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
119963169
NCBI-ProteinID:
XP_038647794
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All DBs
Position
1:64769802..64807364
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AA seq
316 aa
AA seq
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MQRAASGCALAVHWLSGSVQTRYPIGRTGGGKGPRCRVSDWSRAGAAAQLQTASEIPAPL
SGGMMSANYRLSGPSGGESRIYVGNLPTDVRIRDIEDIFYKYGKIRDIDLKNKRGSPPFA
FVEFEDPRDAQDAVYGRNGYDYGVYRLRVEFQRGRGAGGVGGGSRGRPGPAARRSDFRVI
ISGLPPSGSWQDLKDHMREAGDVCYADVLGEGAGVVEFFRKEDMDYAIRKLDDTKFRSHE
VLLNDTNHFFSREKLLTLEFVQTSPEVLVMAGQDQDPFLEVVILPIKAETPLGSQKFLFN
PHSIIGGYFHLQLYIS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagctgccagtggctgtgctctggctgtgcactggttaagcggctctgtgcag
acgcgctaccccattgggaggacaggcggcgggaaggggcctcgctgccgagtcagtgac
tggtcgagggcgggagctgcggctcaactgcaaacagcatccgaaatcccagctccgctc
tctggagggatgatgtcggccaactaccgattgagcggccccagtggcggcgagagccgt
atctatgttgggaacctgcccacagatgtgcggatccgcgatatcgaggatattttctac
aagtacggcaaaatccgagacatcgacctgaagaataagcgcggctccccgccattcgct
ttcgtggagttcgaggacccgagagatgcacaagacgcagtctatggaagaaatggttat
gattatggagtctatcgtttacgggtggagttccagagaggcagaggagctggcggagtc
ggcggtggatctagaggaagaccaggaccagctgcccgcagatcagatttcagggtcatt
atctctggactacctccctctggcagctggcaggatttgaaggatcacatgcgagaggcc
ggtgatgtttgctatgcagatgtgctgggagaaggtgctggagtggtggaattcttccgt
aaggaggatatggactatgcaatacggaagctcgatgacacgaaatttcgttctcatgag
gttctgctaaatgataccaatcatttcttttccagggagaaactgcttacattagagttc
gtgcagacaagcccagaagttctagttatggcaggtcaagatcaagatccctttctagag
gtcgttattctccctatcaaagcagaaactcccctcggtagtcagaaatttctttttaat
ccacattccatcattggcggatattttcatcttcaactctatatttcgtga
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integrated database retrieval system
