Scyliorhinus canicula (smaller spotted catshark): 119963278
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Entry
119963278 CDS
T11175
Symbol
hmx1
Name
(RefSeq) homeobox protein HMX1
KO
K09349
homeobox protein Nkx-5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119963278 (hmx1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
119963278 (hmx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119963278
NCBI-ProteinID:
XP_038648063
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All DBs
Position
3:213575251..213579377
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AA seq
302 aa
AA seq
DB search
MPDKVTGTQGSPPTHQGSSFFIENLLRNHSSGKAAGGAEENEGQLAPRCSLFPSDTAGKH
CSQLCCHICSLGHSARSSPLRESVLQWYTAAQHTCTGCPSPDSLKQEGSSLEEEHCLSLT
ASDLDSPPVSHKREACGQEEDERPGGRRSEAGSSSPAVRSQTDSEQKAGRKKKTRTVFSR
SQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAADLEAVNLS
HSAQRIVRVPILYHENRPPGALSFSLPQVPPPLVSFASSANYPLATFTPSMSFLRSQMSG
LV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgccggataaagtgacggggactcagggctcgccgcccacccaccagggctcttccttc
tttatagagaaccttctccggaatcacagcagcggcaaggcggcgggcggagcggaggag
aatgagggccagctcgctcccaggtgcagccttttccccagcgacactgcggggaagcat
tgcagccagctgtgctgtcacatctgcagcctggggcacagtgcgcggagctcgccactc
agggagagtgtgttgcagtggtacacggcagcacagcacacatgtaccggttgccccagc
ccagacagtctgaaacaagaaggctccagtttggaggaagagcactgtctttcccttaca
gccagcgacctggactccccacctgtctcacacaaaagggaggcctgcggccaggaggag
gacgagcggccgggggggaggaggtcagaggcgggcagcagcagcccggctgtcagaagc
cagacggactccgagcagaaagcgggccgcaagaagaaaacgcgcaccgtcttcagcagg
agtcaggttttccagctggagtccacgttcgacatgaagcgctacctcagcagctcggag
agggcgggcctggccgcttccctccacctcaccgagacccaggtcaaaatctggttccag
aaccggaggaacaaatggaagaggcagctggccgccgacctggaggcggtcaacctctcc
cacagcgcgcagaggattgtccgagtccccattctgtatcacgaaaacagaccgccggga
gccttaagcttcagcctgcctcaagtgccacctccgctggttagcttcgccagctctgca
aactacccgctcgccaccttcaccccttccatgtctttcctgaggtcacagatgagtggg
ctcgtctaa
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