Scyliorhinus canicula (smaller spotted catshark): 119963343
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Entry
119963343 CDS
T11175
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119963343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119963343
03041 Spliceosome [BR:
scau03041
]
119963343
03032 DNA replication proteins [BR:
scau03032
]
119963343
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
119963343
Spliceosome [BR:
scau03041
]
Complex A
U1 snRNP components
Sm proteins
119963343
U2 snRNP components
119963343
Complex B
U1 snRNP components
119963343
U4/U6.U5 tri-snRNP components
119963343
Complex C
U2 snRNP components
119963343
DNA replication proteins [BR:
scau03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
119963343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
119963343
NCBI-ProteinID:
XP_038648274
LinkDB
All DBs
Position
3:227967975..227968505
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALAGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgttgaatccaaaaccattcctcaatggcttaactggcaaaccggtgatg
gtgaagttaaagtggggaatggaatacaagggctacttggtgtcagttgatggatatatg
aacatgcagttggcgaacacagaagaatatattgatggtgctttagcgggacaccttggc
gaagtcctaataaggtgtaacaatgttctgtacatcagaggagttgaggaagaggaagaa
gatggagaaatgagagagtaa
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