Scyliorhinus canicula (smaller spotted catshark): 119963419
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Entry
119963419 CDS
T11175
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119963419 (pcdh10a)
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119963419 (pcdh10a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
CDC13_N
Motif
Other DBs
NCBI-GeneID:
119963419
NCBI-ProteinID:
XP_038648437
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All DBs
Position
3:245467547..245523951
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AA seq
987 aa
AA seq
DB search
MIVFLLLWMWLQRAGGQIRYSVPEEQEHGTFVGNIAEDLGLDVTKLAARRFQTVASSRSP
HLEVNLENGVLFVNEKMDRELICRQSASCLLHLELFLENPLELFRVEIEIVDINDNPPGF
PEADLTVEISESASAGTRLPLESAFDPDVGSNSLRTYQITPNSYFQLDVQTQGDGNKFAE
LVLEKALDREQQAVHRYVLTAVDGGLPQRTGTALLTIRVLDSNDNVPIFEQSVYTVSLPE
NAPLGTLLIQLNATDRDQGKNGEVVYSFSNHVSPRVKELFSIESRSGWLEVKGTIDYEES
SLHQIYVQAKDLGPNAVPAHCKVLVKVTDVNDNAPEISFSTVSDSVNESAAPGTVVALLS
VTDRDSGENGQLQCEILGQVPFKLKSSFKNYYTIVTDGPLDRELRDSYTITILAKDRGSP
PLASSKSIKVQVADENDNAPRFSQPSYDVYVTENNVPGAYIYAVTAVDPDMGQNAYISYS
ILECDIQGMSVFTYVSINSENGYLYALRSFDYEQLKEFSFTVQAKDSGSPALSSNTTINI
IIVDQNDNAPSIVSPVAKNGSAKEMVPRSAEPGYLVARLVAVDADDGDNARLTFYIAKGN
ELGLFRMDWRSGELKTARRLASTKKDPSSPYELLIEVRDHGQPPLSATATILVMAVDSAV
DRQGERGNRAGNPKDNSLNLTLILIIALGSVSFVFLLAMIMLAVRCQKDKKLNVYSCLAG
ECCACCRQARNRKKKLSKSDIMLVQTTNPNAPQVSVEEGSFGHHSQNYCYQVCLTPESAK
TDLMFLKPCSPARSTDADHNPCGAIITGYTDQQPDIISNGSILSSETKHQRTELSFLVDR
PRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATSRAHNSGADLFSNCTEECKALGHSD
RCWMPTFVPTDGRQGPDYRSNLHVPGMDSVPDTEVYEAPEQTGEKSFSTFGKEKSHPSNS
EKKEYDALLPNTRAPYKPPYLTRKRIC
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgattgtctttctgctgctgtggatgtggctgcagcgcgctggcggccagatccgctac
tcggtgcccgaggagcaggagcatggcaccttcgtgggcaatatcgcggaggacctggga
ctggacgtgaccaagctggcggcccgccgcttccagacggtggcgagttcgcgctcgccg
cacctggaggtgaacctggagaacggtgtgctgttcgttaacgagaagatggaccgggag
ctgatctgccgccagagcgccagctgcctgctgcacctggagctcttcttggagaacccg
ctcgaacttttccgcgtggagatcgagatcgtggacattaacgacaacccgcccggcttc
ccggaggccgacctgactgtggagatctcggagagcgcgtcggccggcacccgcctgccg
ctggagagcgccttcgacccggacgtgggcagcaactcgctgcgcacctaccagatcacc
cccaacagctacttccagctggacgtacagacccagggcgacggcaacaagttcgccgag
ctggtgctggagaaggcgctggaccgcgagcagcaggcggtgcaccgctatgtgctgacg
gccgtggacggggggctcccccagcgcacgggcacggctctgctcaccatcagggtgctc
gactcgaacgacaacgtgcccatcttcgagcagtccgtctacacggtgagcctgcccgag
aacgcgcccctgggcaccctgctcatccagctcaacgccaccgaccgcgaccagggcaag
aacggcgaggtggtctactcgttcagcaaccacgtctccccccgggtcaaggagctgttc
agcatcgagtcccggagcggctggctcgaggtcaaggggaccatcgactacgaggagagc
agcctgcaccagatctatgtgcaggccaaagatctggggcccaacgcggtgccggctcat
tgcaaagtgctggtcaaagttaccgacgtgaacgacaacgcgccggagatcagcttcagc
accgtgtccgactcggtgaacgagagcgcggcgcccggcaccgtggtggctctgctgagt
gtgaccgaccgagactccggggagaacgggcagctgcagtgtgagatcctgggccaggtc
cccttcaaactcaaatcctcctttaagaattactacaccatcgtgacggacggcccgctg
gaccgggagctcagagactcctacaccatcaccatcctggccaaggacaggggctcgccc
cctctggcctccagcaagtccatcaaggtgcaagtggctgacgagaacgacaacgcgccc
cgcttctcgcaaccttcctacgacgtgtatgtcaccgagaacaacgttcccggggcttat
atttacgcagtgactgccgtggaccccgatatggggcagaatgcctatatctcttactcc
atattggagtgtgacattcagggtatgtccgtctttacctacgtctccatcaactccgag
aatggttacctgtacgccttgcgctctttcgactacgagcagctcaaagagttcagcttc
acggtgcaggcgaaggattcggggagcccagccctgagcagcaacaccaccatcaacatc
atcatcgtggaccagaacgacaacgctccctccatcgtgtcccccgtggccaagaacggc
agcgccaaagagatggtgccccgctcggcggagccgggctacctggtggccaggttggtg
gcggtggacgcggacgatggcgataacgcccgcctcactttctatatcgccaaaggcaac
gagctggggctcttccggatggactggaggagcggggagctcaagacagccaggcgcttg
gccagcaccaagaaggaccccagctccccttacgagctcctgatcgaggtgagggatcac
gggcagccgcctctctccgccaccgccactatcctggtgatggccgtggacagcgcggtg
gaccgccagggggagcggggcaaccgagctgggaaccccaaggacaactcactcaatctg
accctgatcctaatcatcgccctgggctcggtgtccttcgtcttcctcttggccatgatc
atgttggccgttcggtgccagaaggacaagaagctcaacgtctacagctgcctggcgggc
gagtgctgcgcctgctgtcggcaggcgaggaacaggaagaagaaactcagcaagtcggac
atcatgttggtgcagaccacgaaccccaacgcgcctcaggtgtcggtggaggagggcagc
tttggtcaccacagccagaactactgttaccaggtgtgcctgaccccagaatcggccaaa
acggatctcatgttcttgaaaccttgtagcccggcccggagtacggacgctgaccacaac
ccctgtggggcgatcataactgggtacacggaccagcagcctgacatcatttccaatggg
agtatattatcgagcgagacaaaacaccaacggaccgagctcagtttccttgtggacaga
ccccgtcgagttaacagctctgcgttccaggaggcggacatcgtgagctccaaggatagt
ggccacggggacagcgagcagggagatagcgaccacgatgccaccagccgggctcacaac
tccggcgctgatctcttttccaattgcacagaagagtgtaaagcactggggcattcggat
cgttgttggatgcccacctttgtacccacagatggccgccaaggtcctgattaccgcagc
aatctgcatgtccctggcatggactctgtgcctgacaccgaggtctatgaagctccagag
cagactggggagaaatccttctctacatttggaaaagaaaaatcacatccatctaattcg
gaaaagaaagaatatgatgcacttctgcccaacacacgtgcgccttacaagccgccatat
ttaacacggaagagaatttgctag
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