Scyliorhinus canicula (smaller spotted catshark): 119963451
Help
Entry
119963451 CDS
T11175
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119963451 (rnf170)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119963451 (rnf170)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119963451 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119963451
NCBI-ProteinID:
XP_038648528
LinkDB
All DBs
Position
3:254559521..254615812
Genome browser
AA seq
262 aa
AA seq
DB search
MEHHPEQLLGTRFDESSLIEGVSNQVLLTLAITIAMLGGLATFLYRTEHQNIHPENRERV
RELRQHLQTEALNYQDGLERERPQFYNDMSCPVCLQQAAFPVETNCGHLFCGSCIVAYWT
YGTWLGAVNCPICRQMVTLLFPLFSVNDEQQESMQVIQNINDYNRRFSGQPRSFIDRMLD
LPTLLRHAFTELFSIGGLFWMFRIRIFLCLAGALFYLASPLDFIPEAFFGILGFLDDLFV
IFLLLIYISIMYREAVTQRLNR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcacccagagcaattactcggaacaagatttgatgagtcttcactaattgaa
ggagtaagcaaccaagtacttctgacattagctatcaccattgcaatgttgggtggtttg
gcaacattcctgtatagaactgaacaccagaatatccatcctgaaaaccgggaacgtgtg
agggaactccggcaacatctccaaactgaagctttaaattaccaggatggacttgaaagg
gaaaggccccaattctacaatgatatgtcctgtccagtctgtttacagcaagctgcattt
cctgttgaaaccaactgtggtcacctcttctgtggttcctgtattgttgcatattggaca
tatggcacttggttgggagcagttaattgtcccatttgcagacaaatggttacattgtta
ttcccactgttctcagtgaatgacgagcagcaagagtctatgcaggttattcaaaatata
aatgattataacagaagattttctggtcagcccagatcttttatagatcgtatgttggat
ctacccacactactgcgtcatgccttcacagaactcttttcgatcggtggccttttctgg
atgtttcgaatacgaattttcctctgtctggctggtgccttattctatttggcgtcaccg
ctggactttattcctgaagctttctttggaattctgggttttctggacgacctatttgtt
atttttctactcctcatctatatttccatcatgtaccgagaggcggtcacacaaagactg
aacagatga
DBGET
integrated database retrieval system
