KEGG   Scyliorhinus canicula (smaller spotted catshark): 119963467
Entry
119963467         CDS       T11175                                 
Symbol
helq
Name
(RefSeq) LOW QUALITY PROTEIN: helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:scau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scau03400]
    119963467 (helq)
Enzymes [BR:scau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     119963467 (helq)
DNA repair and recombination proteins [BR:scau03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    119963467 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f DGKD_4H RIMB1_N
Other DBs
NCBI-GeneID: 119963467
NCBI-ProteinID: XP_038648555
LinkDB
Position
3:256943627..257019683
AA seq 1098 aa
MNLDQANESQDSNQWVSIRKRVREKNISVKTTPPSKKKYNNCVSVPEMIVKQEEEVHPAA
SLTQDYMEQVDCDSQDDLFGDYDSFADDSCFLAQLEDAEERSPVFTSSPAGNEKEHWKDA
VEPRTTFQNTNLLDCLQNNENETHKHPAEDVTLVTGLQGSSGKESNVASEQICTETLSVL
HAGNEDEPDELPSSQLALLDNFNSPLIKHKSKSLESETSWVLNCCVNDHPNIPLNSESEA
LNLNKMQNQSRTTNPGTCKQLSLKDQMKNTMAGNATAPSPQSSRSKQMKEIVLSEEINVA
LKTIEATSGVDIGPFYGLPSKVKDLIFQFKGIKELYEWQHTCLTLESVQERKNLIYSLPT
SGGKTLVAEILIMQELLCRKNDVLFVLPYVALVQEKVRGLSSFGIEFNFLVEEYAGSKGK
LPPIKHRQKKSLYIATIEKAHSLVNSLIETERINSLGLVVVDELHMLGEGSRGAILEMAL
SKILYISKTTQIIGMSATLNNVSELQHFLRAEHYTSNFRPVQLKEYVKLHDSIYEVDYKS
EDYLTFXRVLSYKYSTNMKKIDPDHILALVTEVIPEHSCLVFCPTKKNCENVSKMLCKYL
TKSFITLKEKEKRALLEELKSIGNGIICPILRQTVPYGLAYHHSGLTNDERKLIEEAYSA
GILCLLTCTSTLAAGVNLPARRVILRSPYVARDFLKRSQYKQMIGRAGRAGIDTEGESIL
ITQEQDKKLVTDLVSRPLECCYSNLMHDNEKGIKDLLLSLIGLKVAQTLDKIVEFMAGTL
LGVQQQQLLKGKSFLEVIKQALEPLTKKDLIEGKVSSSSSDEEEMHHKLQVTKLGHATFK
GSIDLAYCDTLNMDLKKSLEGLVLGNYLHLIYLVTPYNMVSQCTPDWMVYFRQFHHLDVV
EQKVFAIVGVPESFLTKKASGQAVRKTVDGFVVARFYLSLVLYSLFKEMNTWAVAQKFNM
SRGFMQNLLNSAAAFSSSVLHFCEELEEFWAYQALFQDLTHKLSYCVKPELVSLMEVSGV
LEARARQLYKAGYKSLSYLANASPEVLVKTIEHMSRRQAKQIVSSAKMLLNEKAEALQEE
VEELLRLPIDLPLQSVST
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgaatttggaccaggctaatgagagtcaggattcaaatcagtgggtttctatacggaaa
cgagtcagggaaaaaaatatcagtgtcaagacaacaccacccagcaagaaaaagtacaat
aattgcgtgagtgttcctgaaatgattgtgaagcaagaggaggaggtgcaccctgcagca
tcactgacccaggattacatggagcaggttgactgtgacagtcaggacgacctctttggg
gactatgatagctttgcagatgacagctgctttttggcgcagcttgaagatgcagaggaa
agaagtcctgtttttacttcaagcccagcgggtaatgaaaaggaacactggaaagatgct
gtggaacctcggacgacatttcagaataccaacttgcttgattgtctacaaaacaatgag
aacgaaacacacaaacatcctgcagaggatgtgacccttgttaccggcctgcaaggctcg
agtgggaaggagagcaatgttgcaagtgagcagatttgtactgaaactttatctgtgttg
catgctggaaacgaagatgaaccagatgagttaccaagctcacaacttgcactcttagat
aattttaactcaccactgataaaacataaaagcaaaagcttagaatcagaaaccagttgg
gtgttgaactgctgtgtcaatgaccaccctaatatcccattgaattctgagagtgaagcg
ctaaatcttaacaaaatgcaaaaccaatcaaggactacaaatcctggaacatgtaagcag
ttgagtttgaaagatcagatgaaaaacacaatggctggaaatgccacggcaccctcaccg
cagtcatccaggagtaaacagatgaaggagattgttctttctgaggaaataaatgttgct
ctgaaaactattgaagctacttcaggggttgatatcgggcctttttatggacttccgagc
aaagtcaaggatctgattttccagttcaaaggcatcaaagaactttatgagtggcaacat
acttgcttgacattggaatctgtgcaggaaaggaaaaatctgatttattcactgccgaca
agtggtgggaagacactggttgctgagattttgatcatgcaggaattattatgtaggaag
aatgatgtattgtttgttttgccatatgtggctcttgtgcaggaaaaggtgcgaggtctt
tcgtcttttggaatagaatttaatttcttggtggaagaatatgctggaagcaaagggaag
ctccctccaatcaagcatagacagaagaaatctctgtacattgccaccattgaaaaggcc
catagtttggtgaattccctaatagaaacagaaagaattaatagtttgggacttgttgtg
gtggatgagctgcacatgcttggtgaaggaagtcgcggggctatactagagatggcattg
tctaaaatcctctacataagcaaaaccacacaaataattggaatgagcgcaacgctgaat
aatgtgagtgaattgcagcactttttgagggcagaacattacaccagtaactttcgacct
gttcagttaaaagaatatgtcaaacttcatgacagcatttatgaggtagactacaaatca
gaagactacctcacatctcgtgtattaagttacaagtattcaactaatatgaagaagatt
gatccagatcacatacttgcattggtgacggaagttattccagagcactcctgccttgta
ttctgtcccaccaaaaagaattgtgaaaatgtgagcaagatgctctgcaagtatttaacc
aagtcatttataaccctgaaggagaaagaaaagcgtgctcttcttgaagaattgaaaagc
attggaaatggtatcatttgccccattttacgtcagactgtgccatatggattagcttac
caccacagtgggctaacaaacgatgaacggaaacttatagaggaggcctattctgcagga
atactctgcttgcttacttgtacatcaacacttgctgctggtgttaatctaccagctcgg
agggttattctgagatcaccttatgttgccagagatttcctaaagagaagtcagtacaaa
cagatgattggcagagctggccgagctggaattgatacagagggagaaagcattttgata
acacaagagcaggacaaaaagctggttacagacctagtcagcagaccgctagaatgttgc
tacagcaacctcatgcatgacaatgaaaaaggaattaaagatctactgctatccctgatt
gggctaaaggttgctcagacacttgataaaattgttgagttcatggctggcactctgctt
ggtgtacagcagcaacaactcttgaaagggaaaagctttttggaagtcataaaacaagca
ttggaaccattgacgaaaaaggatttaatagagggcaaagtgtcaagtagcagcagtgat
gaggaagaaatgcaccacaagttgcaagtcacaaagctgggtcatgctacgtttaaagga
tcaatagacttggcttactgtgatactttgaacatggacttgaagaaaagtctggagggg
ttggtgcttggcaactatcttcacctcatctacctggtaacaccgtataatatggtttcc
cagtgcactccggattggatggtctattttaggcagtttcatcatttggatgtagttgaa
cagaaggtctttgccattgtgggtgtacccgagagcttccttacaaagaaggcctctggt
caagcagtcaggaagactgtggatggatttgtcgtagcccggttctacctatcgttggtg
ttatactcccttttcaaagagatgaacacgtgggctgtagcgcagaagttcaacatgtct
cgtggctttatgcaaaatcttctgaattcagcagcagcgttctcctctagtgtgctgcat
ttctgtgaggaattagaggagttctgggcataccaggccctctttcaagatctcactcac
aaactgtcatactgtgtgaaaccagaacttgtttctcttatggaagtatcaggcgtcctg
gaggctcgtgctcgacagctgtacaaagccggttataaatctttgtcttatctggctaat
gcaagccctgaagtgttggtgaagacaattgaacatatgtccagacgccaggcaaaacag
atagtttcctctgctaaaatgctgctaaatgaaaaagctgaagctttacaagaagaggtt
gaagagcttttgagattgcccattgacttaccgctacagtcggtatctacttag

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