Scyliorhinus canicula (smaller spotted catshark): 119963507
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Entry
119963507 CDS
T11175
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119963507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119963507
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119963507
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
HECT type E3
119963507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119963507
NCBI-ProteinID:
XP_038648655
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All DBs
Position
3:263239147..263316286
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AA seq
1051 aa
AA seq
DB search
MTSKVQVLCWGHTNLGQLGLGDIHENIVAQPRTSSFFSSKTVQEVACGRYHTAFVLQDGS
VYTCGSNIWGQLGHEKAGYSPEQVAALDAQTIVHTSCGEAHTVALNDQGQVFSWGAGRDG
QLGIDSTEETIRIPRLIRTLSGCVVIQVTCGSWHCMALTKDGRLFAWGQNAHGQLGLGKG
YSSQTSPQCVKSLTGIPLAQIATGGMHSFTLSLSGAVFGWGRNNCGQLGLSDDKDRDVPN
HVKFLRRQKIVYISCGEEHTAALTKSGGVFTFGAGLCGQLGHNFINNEINPRRVQELMGS
EVSQISCGRQHTIAFVPSSGVIYAFGRGNRGQLGSGCTVNSQVPYKVAGNWVTHTHKLHP
NDRSKYCVLKHVCCGGDQSFALFFQHEHSQVPDDFRRLDPQMCVRIINSHVNRWMLSLSG
KDVLNELNAIFSSPACLNGSFLDAQNDEHFKTSPRNPGIDLKAARLFFEKMVNSPYAKLL
QQVTVTLENRLISQLPTSPPDVEAMRAFLILPVLPLFQDAKNYLTFALPFAAAILHLDAN
PSKVLDNWWCWVDAGYFCRLVELYKDVVLYLITRMRTALLAPVFSHYIIDALQVLEKLHK
VNLIANHIDYEVFYIRELSNLVNIETDFLYWASQHAGVKIQPAIAEVPIAFCSYPFVLNA
QAKTKMLQTDAALQMQIAVNRTSLENIFMLLTLGPFLTSSPFLVLHVQRTNLVSDALREL
SIHSDVDLKKPLKVVFLGEEAVDDGGVTKEFFLLLLKELLDPKYGMFTYYEQSRLLWFSE
KTFVELNWFHLIGILCGLAIYNFTVVDLHFPLVLYKKLLNVKPTLEDLKELSPTEGRSLQ
ELLDYPGDNVEETFCLSFAILRENYGVAELQELIPGGKRLPVRKDNRKEFVQAYVDYIFN
NSVQELFSAFSSGFLKVCGGKVLQLFQPSELMAMVVGNTSYNWKELEMSAIYKGDYHPAH
PTIKIFWEVFHDFPLEKKKLFLLFLTGSDRIPIYGMASIRMTIQPTAGGERYLPVAHTCY
NLLDLPKYTSKAALITKLTQAIDHHEGFSLV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaaagtacaggtgttgtgttggggccatacaaatttgggtcaactcggactg
ggtgatattcatgagaacattgttgcccaacccaggacttcttcattctttagcagcaaa
actgtgcaggaggtggcctgcgggagataccatacagcttttgttctgcaagacggaagt
gtctacacatgtggctcaaacatctggggacagctgggccacgagaaagcaggttacagt
ccagaacaagttgccgcactggatgcccagacaattgttcatacgtcttgtggagaagct
cacactgtggccctcaatgaccaaggtcaggtattttcatggggagcaggaagagacggc
cagctggggattgactcaactgaggaaactatccggataccaaggttaatccggactctg
agcgggtgcgtggtcatacaggtcacctgcggaagttggcattgcatggcactcaccaaa
gatggtcgtctctttgcctggggacagaatgctcatggtcagttgggtcttgggaaagga
tattcctctcagaccagcccgcagtgcgtgaagtctctgactggcattccgctggctcag
attgctacgggagggatgcatagcttcaccctctcgctgtcgggcgccgtgttcggctgg
gggaggaacaactgtggtcagctgggacttagtgacgataaagatcgagatgtccccaat
catgtgaagttcctgaggagacagaaaattgtctacatcagttgtggtgaggagcacaca
gccgctctaaccaagagtggaggtgtttttactttcggagctggtctttgtggacagctg
ggccataacttcataaacaacgaaataaatccccgcagagtccaagagttgatgggaagc
gaagtgtctcagataagctgcggcagacagcacaccatcgcctttgtgccttcttctggc
gtaatctatgcgtttggacgtggcaacagagggcagttaggatctggatgcacagttaac
tctcaggttccgtacaaggtggccgggaactgggtaactcacacacacaagctgcatcct
aacgatcggtccaagtattgtgtgctgaagcatgtttgctgtggaggcgatcagagtttt
gcccttttctttcaacatgagcactctcaagttcctgatgatttccgccgtttggaccct
caaatgtgtgtcaggataattaacagccatgtgaataggtggatgctgagcctttcagga
aaggacgtacttaatgaattaaatgcgatattctcttcacctgcgtgtttgaatggcagt
ttccttgatgctcagaatgacgagcattttaaaactagtcctcgaaaccctggcattgac
ttgaaggctgccaggttattttttgagaagatggtgaactctccatacgccaaattacta
cagcaggttactgtgactttagaaaatcgtttgatttcccagttaccgacttcaccgcct
gatgtcgaggccatgagggcgtttttgattttaccggtgcttcctctcttccaagacgcc
aagaattatttgactttcgcccttccatttgccgccgccatactccacttggacgccaac
ccgagcaaagtactggataactggtggtgttgggtggacgctggctacttctgccggctg
gtggagctgtataaagatgtggtgctttacctcataaccaggatgaggacagcattgctg
gctcctgtgtttagccattacatcatcgatgctcttcaggttttggaaaagctgcacaag
gttaacttgattgctaaccatattgactatgaggtgttttacatccgcgagctgagtaac
ttggtcaacattgagactgattttctttactgggcatcccaacatgccggagtgaaaatc
cagccagcgattgcagaggtccccattgctttctgctcctatccttttgtcttgaacgcc
caggcaaaaacaaagatgctgcagacagacgctgccttgcagatgcagatagcagtgaac
aggacgagcctggagaacatcttcatgctgctcacactgggaccatttctgacgagcagc
cctttcctcgtcctgcatgtccagcggactaatctggtcagtgacgccttgagagagctg
agcattcattcagacgtggacttgaaaaagcctttgaaggtggtgttcctgggtgaggag
gcagtggacgatggaggggtgacaaaggaattcttcctgctgctgctgaaggagttgctg
gatcccaagtacggcatgttcacgtactacgaacagtccaggcttttgtggttttcagaa
aaaacatttgtggaattgaactggtttcacctgattgggatcctgtgtggcctggccatt
tataacttcacggtggtggacctgcacttcccgctcgtgctgtacaaaaagttgctgaat
gtgaaacccacgcttgaggatctgaaagagctttctcccacggagggcaggagcctgcag
gaattgctggattaccctggcgacaatgttgaagagactttctgcctcagttttgcgatt
cttcgagaaaactacggtgtggcggagctccaggagctgatccctggaggtaagagacta
cctgtgaggaaggacaacaggaaggaatttgtgcaagcttacgtggactacatcttcaat
aactctgtccaggagctcttctcggctttttccagtggcttcctgaaggtttgtggcggg
aaggtccttcagctcttccagcccagtgagctgatggccatggtggtgggaaacaccagt
tacaactggaaggagttggagatgagtgcaatatacaagggagattaccatcctgcacat
cctaccataaaaatattttgggaagtattccatgattttcctttggaaaaaaagaagttg
tttctgttgtttttgacgggcagtgaccggattcctatttatggcatggcaagtatccgg
atgaccattcagcccacagccggaggggagcgctacctgccggtggctcacacctgttat
aacctgctggatctccccaagtacaccagtaaagcagcattgattactaaactcactcag
gctatcgaccaccacgaaggcttcagcttggtatga
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