Scyliorhinus canicula (smaller spotted catshark): 119963513
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Entry
119963513 CDS
T11175
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119963513
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119963513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
Pyr_excise
Epsilon_antitox
KAsynt_C_assoc
T3SS_basalb_I
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
119963513
NCBI-ProteinID:
XP_038648682
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All DBs
Position
3:267069460..267207958
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AA seq
1010 aa
AA seq
DB search
MSSFNLDRFRYEKKAAAAGESGHRRQRRGTPPAPGHREEEPPAVTIVPETPEGKQSNLLS
YFSKEEKGVLFLDSESENEEPCKNSLSCPAVNGRPKDLQKLHDPVDFSSDEDEQLSPKAN
VSSLDCSGSSHFNSDLGDSTAAKIDKLMEIFPNRTNAELMQIIESTSTLDGAVASGLIMF
GEEATARKRKLDMSQNSSSEESDDLPISSIKKKKPNRLESQDSVEDFEKKESILRKLHNR
FSNLDKEELREVLEEHDWCYWEALETLQTFANQEDEMPCIPEPKSINGKDATSYCKVQPK
EIPAVQLKRTEATKDQNGKSKKHDKRQKDERIAQWESSDSEDRESILSGDESSLDEDYTS
ADEEVEDECRTKIVSFLQDATVDELTLIPQCSLRKSQKITELRPFNNWEALFKKFNRSNG
LSEDLIWNCKIVIKEREVVLKLMNRCAEISQRLEMQVTEITDDGGSHRTIEQPAILSKSL
ELKPYQLVGLNWLVLLNKHRVNGILADEMGLGKTVQAISFLAYLYQEGDKGPHLIIVPAS
TLDNWIRELKQWCPALKVLLYYGSLEDRKVLRSDILHKFVDFCVIVTTYNCAISNADDRS
LFRRLKLHYAVYDEGHMLKNMSSIRYQHLMTFNAEHRLLLTGTPLQNNLLELMSLLNFVM
PNMFSSSTSEIRRMFSSKTKILEQQSTFEKGRIAHAKKIMKPFILRRVKSEVLQQLPPKQ
DRQELCSMSEKQEQAYTALSKKLKKSINSNEKNELCNVMMQLRKMANHPLLHRQYYTAEK
LRKMAKLMKKEPTHRDANPDLIFEDMEAMTDFELHSLCQEYASIRSFQLEMELLLDSGKF
QILENILAELKEEGSRVVLFSQFTMMLDILEVFLRHHKHRYLRLDGKTPISDRIHLIDQF
NTDMDLFVFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQKKIVHVVK
LISKGTIEESMLKIGEHKLKLEQDMTSTETGGEGNIPLNMATLLKTSLGL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttcaacctcgaccgcttccgttatgagaagaaagccgccgccgccggggag
agcggccaccggcgtcaacggcgcggcaccccgccagcccccggccaccgggaggaggag
cccccggcagtgaccattgtaccagagacaccagaaggaaagcagtccaaccttttatca
tattttagcaaagaagaaaaaggagtcctttttcttgattctgaatctgaaaatgaagaa
ccgtgcaagaacagtttatcatgtccagcagtgaatggaaggccaaaggaccttcaaaaa
ctacatgatccagttgacttttcatctgatgaggatgagcagctttctccaaaagcgaat
gtgtcttccctggactgcagtggctcatcacactttaattctgacttgggggactctact
gctgccaaaatagacaaactgatggaaatatttccaaatagaacaaatgctgaactaatg
cagataattgaatcaacaagtacactggatggagctgtagcttcgggattaattatgttt
ggcgaagaagccactgctcggaaaaggaaacttgatatgtcccaaaacagcagctctgaa
gaaagtgatgatctccctatttcctccatcaagaagaagaaacctaatcgtcttgagtca
caagattcagttgaagattttgagaagaaagagtccatcctgagaaaacttcacaatagg
ttttcaaatttagataaagaggaactaagggaagtcctggaagaacatgactggtgctat
tgggaggccttggaaaccttgcagacattcgccaatcaagaagatgaaatgccttgtata
ccagaacctaaaagcataaatggaaaagatgccacatcgtattgtaaagtacagccaaaa
gagataccagcagtgcagttgaaacgaactgaagcaacaaaagatcaaaatggtaaaagc
aaaaaacatgataaaaggcaaaaagatgagagaattgctcaatgggaaagtagcgattcc
gaagatagagaatccattctttctggtgatgagagctcacttgatgaggactacactagt
gcagatgaagaggtggaagatgaatgcaggactaaaattgtcagcttcttgcaggatgct
acagtggatgaacttacactcatacctcagtgttctttgagaaagtctcagaagattaca
gaactgcggccctttaacaattgggaagcactgtttaaaaagtttaatcggtcaaatggt
ttgtctgaagacttgatatggaactgcaaaatagtaatcaaggaacgggaagtggtactt
aagcttatgaacagatgtgcagaaatctcccaaagattagagatgcaagtgacggaaata
actgatgatggtggaagtcacaggaccattgaacagccagccattctgagtaaaagtttg
gaacttaaaccatatcaactagtgggactaaactggttggtcttgttgaataaacatcga
gtgaatggtatattagcagatgaaatgggcttggggaaaactgtacaagctatatcattc
cttgcttatctttaccaggaaggagataaaggaccacatctcatcattgtacctgcctca
accctagacaactggattcgagaacttaagcaatggtgccctgctctcaaagtccttctg
tattatggatctttagaagaccggaaggtccttcgatctgatattcttcataagtttgtg
gacttctgtgtaatagtaactacgtataactgcgcaataagtaatgcagatgaccgtagt
ctctttagacgtttgaaactccattatgcggtttatgatgaagggcacatgctgaaaaat
atgagttccattcgttatcagcatctcatgacatttaatgctgaacatcgtttgctgttg
actgggactccactgcagaataatcttctagaattgatgtctctgttgaattttgtcatg
ccaaacatgttcagcagtagtaccagtgagattcgcaggatgttttcctctaaaactaaa
atcttggagcaacaaagtacttttgaaaaagggaggattgctcatgccaaaaagatcatg
aagccatttatcttgaggagggtaaagagtgaggtcttgcagcaactaccacccaaacaa
gatcgccaagaactatgttcaatgtctgaaaaacaggaacaggcatatactgccctctcc
aagaagttgaagaaatccatcaacagcaacgaaaagaatgaattatgtaatgtgatgatg
caacttcggaagatggcaaaccatccactgctccacaggcagtattacactgcagaaaag
ctccggaaaatggccaagctgatgaaaaaggagcctactcacagagatgccaatcctgat
ctcatctttgaagacatggaggcgatgacagattttgaattgcacagtctatgccaagag
tatgctagcataagaagctttcaattagaaatggaattgctcttggattcagggaagttc
caaattctggagaatatacttgcagagctgaaggaggagggttccagggttgtcctcttt
agccaatttacaatgatgttggacattctagaagtattcttgagacaccacaagcacagg
tatcttcggttggatggcaaaaccccaatctctgacagaatccacttgatagatcaattt
aatacagatatggatctttttgttttcctgttatcaaccaaagccggaggactgggcata
aacctcacctcagccaacattgtcatccttcacgatattgactgcaatccctataatgat
aaacaagcagaagatcgatgtcacagagtaggacagaaaaagatagtgcatgttgtaaaa
ctgatcagcaaagggacaattgaagagtccatgcttaaaattggtgagcataaactgaaa
ttagaacaggatatgacttcaacagaaacaggaggcgagggaaacattccacttaatatg
gcaacactgttgaagacttcattagggttgtaa
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